RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CRACR2AQ9BSW2 395 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 NDC1Q9BTX1 674 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 WWP1Q9H0M0 922 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 OR52A5Q9H2C5 316 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 CBX8Q9HC52 389 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 NT5MQ9NPB1 228 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 OR6C2Q9NZP2 312 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 L3MBTL1Q9Y468 752 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 RAI1Q7Z5J4 1906 aaPredicted RBP4.39□□□□□ -1.71
SNCA-213ENST00000618500 POP7O75817 140 aaKnown RBP4.39□□□□□ -1.71
SNCA-213ENST00000618500 RNF8O76064 485 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 HLA-DQB2P05538 268 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 SLC35G4P0C7Q5 338 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 ESRRAP11474 423 aaPredicted RBP4.39□□□□□ -1.71
SNCA-213ENST00000618500 GZMAP12544 262 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 PAX1P15863 534 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 PSMA2P25787 234 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 MIPP30301 263 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 MTIF2P46199 727 aaKnown RBP4.39□□□□□ -1.71
SNCA-213ENST00000618500 APBA1Q02410 837 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 XRCC4Q13426 336 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 RBBP7Q16576 425 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 FBXL19-AS1Q494R0 122 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 SWT1Q5T5J6 900 aaKnown RBP4.39□□□□□ -1.71
SNCA-213ENST00000618500 TAF3Q5VWG9 929 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 SCYL2Q6P3W7 929 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 ACAD11Q709F0 780 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 PAQR7Q86WK9 346 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 PRIMA1Q86XR5 153 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 KRTAP1-3Q8IUG1 177 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 PAF1Q8N7H5 531 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 CCDC110Q8TBZ0 833 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 C18orf12Q96KH6 178 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 FRMD6Q96NE9 622 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 OR2A14Q96R47 310 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 SECISBP2Q96T21 854 aaKnown RBP4.39□□□□□ -1.71
SNCA-213ENST00000618500 AGPAT1Q99943 283 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 SLC25A51Q9H1U9 297 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 PCDH18Q9HCL0 1135 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 TXLNGQ9NUQ3 528 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 INTS7Q9NVH2 962 aaKnown RBP4.39□□□□□ -1.71
SNCA-213ENST00000618500 CHKBQ9Y259 395 aa4.39□□□□□ -1.71
SNCA-213ENST00000618500 LOC285095A0A1B0GVY8 99 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 TARM1B6A8C7 271 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 F5H423 210 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 GAPDHSO14556 408 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 PROM1O43490 865 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 SGTAO43765 313 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 CTAG2O75638 210 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 ZNF189O75820 626 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 KLHL18O94889 574 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 AP2A2O94973 939 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 NADKO95544 446 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 NDST3O95803 873 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 RAF1P04049 648 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 PNMA6AP0CW24 399 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 RPL7AP62424 266 aaKnown RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 ADAM8P78325 824 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 PLOD1Q02809 727 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 SLC25A11Q02978 314 aaKnown RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 PIGHQ14442 188 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 PDK2Q15119 407 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 TUSC1Q2TAM9 212 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 PTCHD3Q3KNS1 767 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 SLC25A35Q3KQZ1 300 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 ZC3H12BQ5HYM0 836 aaKnown RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 NCBP2-AS2Q69YL0 99 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 FAAH2Q6GMR7 532 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 NLRP9Q7RTR0 991 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 AMIGO1Q86WK6 493 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 TTC29Q8NA56 475 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 FAM98AQ8NCA5 519 aaKnown RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 HMGCLL1Q8TB92 370 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 FAM222BQ8WU58 562 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 COX4I2Q96KJ9 171 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 ZNF354BQ96LW1 612 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 C12orf66Q96MD2 445 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 TUBB6Q9BUF5 446 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 SLC7A5P2Q9GIP4 190 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 THAP2Q9H0W7 228 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 SRMSQ9H3Y6 488 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 COQ3Q9NZJ6 369 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 FEZ2Q9UHY8 353 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 ASB1Q9Y576 335 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 SPTAN1Q13813 2472 aaKnown RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 PRRC2AP48634 2157 aaKnown RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 DOCK10Q96BY6 2186 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 CCDC78A2IDD5 438 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 FAM47E-STBD1D6RA91 191 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 QSOX1O00391 747 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 BTN3A3O00478 584 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 LCA5LO95447 670 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 C8BP07358 591 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 FERP16591 822 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 UGT2B7P16662 529 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 HOXC12P31275 282 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 TRHRP34981 398 aaPredicted RBP4.38□□□□□ -1.71
SNCA-213ENST00000618500 GRM7Q14831 915 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 CDSNQ15517 529 aa4.38□□□□□ -1.71
SNCA-213ENST00000618500 RNF44Q7L0R7 432 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms