RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 MAGEB16A2A368 324 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 MATN2O00339 956 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 BTN3A3O00478 584 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 TTI1O43156 1089 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 RAD1O60671 282 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 NIPSNAP2O75323 286 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 GPC4O75487 556 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 STK17BO94768 372 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 PGAM1P18669 254 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 CDH3P22223 829 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 AOAHP28039 575 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 FMO4P31512 558 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 DHX9Q08211 1270 aaKnown RBP15.51■□□□□ 0.07
BRCA1-228ENST00000618469 TUBB3Q13509 450 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 KCNAB1Q14722 419 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 DNAJC21Q5F1R6 531 aaKnown RBP15.51■□□□□ 0.07
BRCA1-228ENST00000618469 FBXO38Q6PIJ6 1188 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 OTOAQ7RTW8 1153 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 TMEM135Q86UB9 458 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 AMIGO1Q86WK6 493 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 TBC1D21Q8IYX1 336 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 IL22RA1Q8N6P7 574 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 CFAP61Q8NHU2 1237 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 GSDMBQ8TAX9 411 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 FAM136AQ96C01 138 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 SLC41A2Q96JW4 573 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 SIGLEC10Q96LC7 697 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 TCF12Q99081 682 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 STARD5Q9NSY2 213 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 SOHLH2Q9NX45 425 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 SEMA5BQ9P283 1151 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 RNF14Q9UBS8 474 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 PLAGL1Q9UM63 463 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 VPS9D1Q9Y2B5 631 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 CRYL1Q9Y2S2 319 aa15.51■□□□□ 0.07
BRCA1-228ENST00000618469 SUV39H1O43463 412 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 ESR1P03372 595 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 EBLN1P0CF75 366 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 CASQ1P31415 396 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 SHMT2P34897 504 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 SLC1A2P43004 574 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 ETF1P62495 437 aaKnown RBP15.5■□□□□ 0.07
BRCA1-228ENST00000618469 CRYMQ14894 314 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 MORF4L2Q15014 288 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 LONRF1Q17RB8 773 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 BBS9Q3SYG4 887 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 CYB5D1Q6P9G0 228 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 SYT10Q6XYQ8 523 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 CENPUQ71F23 418 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 KMT5CQ86Y97 462 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 RASGRP3Q8IV61 690 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 DENND6AQ8IWF6 608 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 CACNA2D3Q8IZS8 1091 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.5■□□□□ 0.07
BRCA1-228ENST00000618469 SKA2Q8WVK7 121 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-228ENST00000618469 NKD1Q969G9 470 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 BIRC8Q96P09 236 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 KRT12Q99456 494 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 ULBP3Q9BZM4 244 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 TRIM31Q9BZY9 425 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 FBXO6Q9NRD1 293 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-228ENST00000618469 C20orf96Q9NUD7 363 aaPredicted RBP15.5■□□□□ 0.07
BRCA1-228ENST00000618469 INTS10Q9NVR2 710 aaKnown RBP15.5■□□□□ 0.07
BRCA1-228ENST00000618469 POLG2Q9UHN1 485 aa15.5■□□□□ 0.07
BRCA1-228ENST00000618469 TSR3Q9UJK0 312 aaKnown RBP15.5■□□□□ 0.07
BRCA1-228ENST00000618469 UBR5O95071 2799 aaPredicted RBP15.49■□□□□ 0.07
BRCA1-228ENST00000618469 C2orf74A8MZ97 194 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 H3BMM5 538 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 KDM1AO60341 852 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 ZBTB11O95625 1053 aaPredicted RBP15.49■□□□□ 0.07
BRCA1-228ENST00000618469 RPN2P04844 631 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 IVDP26440 423 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 HSD11B2P80365 405 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 TLE1Q04724 770 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 ABRQ12979 859 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 CTBP1Q13363 440 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 IL11RAQ14626 422 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 MSS51Q4VC12 460 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 ZNF789Q5FWF6 425 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 UNC5DQ6UXZ4 953 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 KCNMB4Q86W47 210 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 PPP1R3BQ86XI6 285 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 PTRH1Q86Y79 214 aaKnown RBP15.49■□□□□ 0.07
BRCA1-228ENST00000618469 DCUN1D3Q8IWE4 304 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 ADGRF3Q8IZF5 1079 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 NLGN4XQ8N0W4 816 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 CARFQ8N187 725 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 NLGN4YQ8NFZ3 816 aaPredicted RBP15.49■□□□□ 0.07
BRCA1-228ENST00000618469 SNF8Q96H20 258 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 FAM167BQ9BTA0 163 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 ACTR10Q9NZ32 417 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 ANKMY1Q9P2S6 941 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 CIDEBQ9UHD4 219 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 PILRAQ9UKJ1 303 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 RARRES3Q9UL19 164 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 RUVBL2Q9Y230 463 aaKnown RBP15.49■□□□□ 0.07
BRCA1-228ENST00000618469 TMEM184BQ9Y519 407 aaPredicted RBP15.49■□□□□ 0.07
BRCA1-228ENST00000618469 BSNQ9UPA5 3926 aa15.49■□□□□ 0.07
BRCA1-228ENST00000618469 SLC9B1P1A6NJY1 282 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 E5RI56 91 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms