RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 C8AP07357 584 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 SELENOVP59797 346 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 MPP1Q00013 466 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 PDSS1Q5T2R2 415 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 AGAP11Q8TF27 550 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 C15orf40Q8WUR7 153 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 HMGB4Q8WW32 186 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 TP53INP1Q96A56 240 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 ENY2Q9NPA8 101 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 PAK6Q9NQU5 681 aaPredicted RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 ABCB8Q9NUT2 735 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 SMIM28A0A1B0GU29 152 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 EPHB6O15197 1021 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 COQ9O75208 318 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 MARCKSL1P49006 195 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 ECT2LQ008S8 904 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 LRRC69Q6ZNQ3 347 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 LINGO2Q7L985 606 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 OR2L8Q8NGY9 312 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 GTPBP3Q969Y2 492 aaKnown RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 CEP295NLQ96MC4 621 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 DHX33Q9H6R0 707 aaKnown RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 MED11Q9P086 117 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 TEX13CA0A0J9YWL9 993 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 COL6A1P12109 1028 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 DPY19L1Q2PZI1 675 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 HSDL2Q6YN16 418 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 KAT2AQ92830 837 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 ART5Q96L15 291 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 CPXM1Q96SM3 734 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 OR51V1Q9H2C8 321 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 SLC33A1O00400 549 aaPredicted RBP10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 SPIN4Q56A73 249 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 PAMR1Q6UXH9 720 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 OXR1Q8N573 874 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 LRRN4Q8WUT4 740 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 NXNL1Q96CM4 212 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 PTPN18Q99952 460 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 CCDC28BQ9BUN5 200 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 ZNF221Q9UK13 617 aa10.98□□□□□ -0.65
CCDC144B-208ENST00000618081 L1CAMP32004 1257 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 CRISP3P54108 245 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 DSC2Q02487 901 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 RAB39AQ14964 217 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 C8orf48Q96LL4 319 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ZSCAN5AQ9BUG6 496 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 GOLGA2P5Q9HBQ8 144 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ABCB9Q9NP78 766 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ARHGEF4Q9NR80 690 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 POLR3BQ9NW08 1133 aaPredicted RBP10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 CDH22Q9UJ99 828 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 LRRC10BA6NIK2 292 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 SLC38A8A6NNN8 435 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 SCELO95171 688 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ELOAQ14241 798 aaKnown RBP10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 C4orf46Q504U0 113 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 CWF19L1Q69YN2 538 aaKnown RBP10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 TRABD2AQ86V40 505 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 WDR26Q9H7D7 661 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 RC3H2Q9HBD1 1191 aaKnown RBP10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 C19orf25Q9UFG5 118 aaPredicted RBP10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 LYPLA1O75608 230 aaPredicted RBP10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 RB1P06400 928 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 PRDX6P30041 224 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 POU5F1Q01860 360 aaKnown RBP10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 SLC5A9Q2M3M2 681 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ANKRD46Q86W74 232 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 FCGR1BQ92637 280 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 HPS1Q92902 700 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 EPYCQ99645 322 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ENPP3O14638 875 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 WNT9AO14904 365 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ORC5O43913 435 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 PLA2G16P53816 162 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ARF3P61204 181 aaPredicted RBP10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ARF1P84077 181 aaKnown RBP10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 DDR1Q08345 913 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 HSDL1Q3SXM5 330 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 CLEC6AQ6EIG7 209 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 KLHL6Q8WZ60 621 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 HTRA1Q92743 480 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 PDZD7Q9H5P4 517 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 TBC1D17Q9HA65 648 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 PACSIN3Q9UKS6 424 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ASB3Q9Y575 518 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 MID1O15344 667 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 GADD45GO95257 159 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 RYKP34925 604 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 DGKEP52429 567 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 LRRC32Q14392 662 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 KCT2Q8NC54 265 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ARHGAP9Q9BRR9 750 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ZNF536O15090 1300 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ADGRB2O60241 1585 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 SRPRAP08240 638 aaKnown RBP10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 ICAM3P32942 547 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 TARDBPQ13148 414 aaKnown RBP eCLIP10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 GRIK5Q16478 980 aa10.97□□□□□ -0.65
CCDC144B-208ENST00000618081 LRRC55Q6ZSA7 311 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms