RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 IQCF5A8MTL0 148 aa24.39■■□□□ 1.49
VEGFA-228ENST00000617771 GPC4O75487 556 aa24.39■■□□□ 1.49
VEGFA-228ENST00000617771 NDUFS3O75489 264 aa24.39■■□□□ 1.49
VEGFA-228ENST00000617771 CHRM5P08912 532 aaPredicted RBP24.39■■□□□ 1.49
VEGFA-228ENST00000617771 PVRP15151 417 aa24.39■■□□□ 1.49
VEGFA-228ENST00000617771 UGT2B7P16662 529 aa24.39■■□□□ 1.49
VEGFA-228ENST00000617771 CYP2A7P20853 494 aa24.39■■□□□ 1.49
VEGFA-228ENST00000617771 VPS41P49754 854 aa24.39■■□□□ 1.49
VEGFA-228ENST00000617771 GPS1Q13098 491 aa24.39■■□□□ 1.49
VEGFA-228ENST00000617771 FAM199XQ6PEV8 388 aaPredicted RBP24.39■■□□□ 1.49
VEGFA-228ENST00000617771 LKAAEAR1Q8TD35 194 aa24.39■■□□□ 1.49
VEGFA-228ENST00000617771 MAGOHBQ96A72 148 aaKnown RBP24.39■■□□□ 1.49
VEGFA-228ENST00000617771 KLHL25Q9H0H3 589 aa24.39■■□□□ 1.49
VEGFA-228ENST00000617771 AKIRIN1Q9H9L7 192 aaPredicted RBP24.39■■□□□ 1.49
VEGFA-228ENST00000617771 PIEZO2Q9H5I5 2752 aa24.39■■□□□ 1.49
VEGFA-228ENST00000617771 BSNQ9UPA5 3926 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 TCRBV7S3A2A0A539 114 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 CDC14CA4D256 554 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 KRT14P02533 472 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 AOAHP28039 575 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 PTPN4P29074 926 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 TERF1P54274 439 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 NFKB2Q00653 900 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 ABRQ12979 859 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 GPS2Q13227 327 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 KCNJ11Q14654 390 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 ARMC3Q5W041 872 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 MRNIPQ6NTE8 343 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 SDCCAG8Q86SQ7 713 aaPredicted RBP24.38■■□□□ 1.49
VEGFA-228ENST00000617771 KRT222Q8N1A0 295 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 C19orf47Q8N9M1 422 aaKnown RBP24.38■■□□□ 1.49
VEGFA-228ENST00000617771 OR1L3Q8NH93 324 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 C9orf43Q8TAL5 461 aaPredicted RBP24.38■■□□□ 1.49
VEGFA-228ENST00000617771 GSDMBQ8TAX9 411 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 N4BP2L2Q92802 583 aaPredicted RBP24.38■■□□□ 1.49
VEGFA-228ENST00000617771 CLIP3Q96DZ5 547 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 MFSD3Q96ES6 412 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 TCTN2Q96GX1 697 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 OR2A14Q96R47 310 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 SLC7A5P2Q9GIP4 190 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 P2RY12Q9H244 342 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 PLAGL1Q9UM63 463 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 SOX13Q9UN79 622 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 CDYLQ9Y232 598 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 KCNMB2Q9Y691 235 aa24.38■■□□□ 1.49
VEGFA-228ENST00000617771 A0A0J9YY10 115 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 MEN1O00255 615 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 KPNA5O15131 536 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 PFDN6O15212 129 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 VAPBO95292 243 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 FURINP09958 794 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 TPBGLP0DKB5 382 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 RPS3P23396 243 aaKnown RBP eCLIP24.37■■□□□ 1.491e-7■■□□□ 12.2
VEGFA-228ENST00000617771 MAGEA6P43360 314 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 ITGA1P56199 1179 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 KIR2DS3Q14952 304 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 UNC5DQ6UXZ4 953 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 ZNF517Q6ZMY9 492 aaPredicted RBP24.37■■□□□ 1.49
VEGFA-228ENST00000617771 ATG14Q6ZNE5 492 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 CDHR3Q6ZTQ4 885 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 TRIM73Q86UV7 250 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 VRK3Q8IV63 474 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 DCUN1D3Q8IWE4 304 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 DSELQ8IZU8 1212 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 SLC38A9Q8NBW4 561 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 MS4A14Q96JA4 679 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 ACTR5Q9H9F9 607 aaPredicted RBP24.37■■□□□ 1.49
VEGFA-228ENST00000617771 GRPEL1Q9HAV7 217 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 SPHK1Q9NYA1 384 aa24.37■■□□□ 1.49
VEGFA-228ENST00000617771 FARSAQ9Y285 508 aaKnown RBP24.37■■□□□ 1.49
VEGFA-228ENST00000617771 ISM1B1AKI9 464 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 E7EQ34 232 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 SLCO2B1O94956 709 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 RAB28P51157 221 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 ZNF789Q5FWF6 425 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 RNF187Q5TA31 235 aaPredicted RBP24.36■■□□□ 1.49
VEGFA-228ENST00000617771 PRAMEF17Q5VTA0 474 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 IZUMO3Q5VZ72 239 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 TTC27Q6P3X3 843 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 CES3Q6UWW8 571 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 SYVN1Q86TM6 617 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 GPR135Q8IZ08 494 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 CFAP61Q8NHU2 1237 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 CHRNA10Q9GZZ6 450 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 CHST8Q9H2A9 424 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 ZNF462Q96JM2 2506 aa24.36■■□□□ 1.49
VEGFA-228ENST00000617771 PGRMC1O00264 195 aaKnown RBP24.35■■□□□ 1.49
VEGFA-228ENST00000617771 ZSCAN12O43309 604 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 SUV39H1O43463 412 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 HBQ1P09105 142 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 PAMP19021 973 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 ARNTP27540 789 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 PKLRP30613 574 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 KYNUQ16719 465 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 UGT8Q16880 541 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 KCTD19Q17RG1 926 aaPredicted RBP24.35■■□□□ 1.49
VEGFA-228ENST00000617771 SLC5A12Q1EHB4 618 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 PLEKHS1Q5SXH7 462 aa24.35■■□□□ 1.49
VEGFA-228ENST00000617771 KIAA0930Q6ICG6 404 aaPredicted RBP24.35■■□□□ 1.49
VEGFA-228ENST00000617771 TTC23LQ6PF05 361 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms