RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 PPP1R2P1Q96PQ5 205 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 VPS35Q96QK1 796 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 WDR24Q96S15 920 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 FERMT1Q9BQL6 677 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 SLC25A23Q9BV35 468 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 OSGEPL1Q9H4B0 414 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 ACTL8Q9H568 366 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 VIPAS39Q9H9C1 493 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 WASH6PQ9NQA3 447 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 NPDC1Q9NQX5 325 aaPredicted RBP8.37□□□□□ -1.07
GPC6-202ENST00000617456 NDUFA13Q9P0J0 144 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 ZFATQ9P243 1243 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 TRHDEQ9UKU6 1024 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 PADI1Q9ULC6 663 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 HEY1Q9Y5J3 304 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 ALG6Q9Y672 507 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 DNMT3AQ9Y6K1 912 aaPredicted RBP8.37□□□□□ -1.07
GPC6-202ENST00000617456 CELSR2Q9HCU4 2923 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 POLQO75417 2590 aa8.37□□□□□ -1.07
GPC6-202ENST00000617456 C2CD3Q4AC94 2353 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 MN1Q10571 1320 aaPredicted RBP8.36□□□□□ -1.07
GPC6-202ENST00000617456 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 LILRA5A6NI73 299 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 ARGFXA6NJG6 315 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 BTNL10A8MVZ5 291 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 TCP11X1B4DZS4 312 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 H3BQF6 201 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 MAP3K7O43318 606 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 GRID2O43424 1007 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 SPOPO43791 374 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 UBXN7O94888 489 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 NDST3O95803 873 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 DDAH2O95865 285 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 ANKRD34CP0C6C1 535 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 F3P13726 295 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 HOXB1P14653 301 aaPredicted RBP8.36□□□□□ -1.07
GPC6-202ENST00000617456 CPA3P15088 417 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 XRCC1P18887 633 aaPredicted RBP8.36□□□□□ -1.07
GPC6-202ENST00000617456 MAGEA1P43355 309 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 SPA17Q15506 151 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 INPP5JQ15735 1006 aaPredicted RBP8.36□□□□□ -1.07
GPC6-202ENST00000617456 PPP2R5EQ16537 467 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 PLA2G4EQ3MJ16 856 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 FCRLBQ6BAA4 426 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 C11orf63Q6NUN7 778 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 TMEM53Q6P2H8 277 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 FAM92BQ6ZTR7 304 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 CCDC121Q6ZUS5 278 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 HDXQ7Z353 690 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 PPP1R3BQ86XI6 285 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 PHYKPLQ8IUZ5 450 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 WDR75Q8IWA0 830 aaKnown RBP8.36□□□□□ -1.07
GPC6-202ENST00000617456 LPCAT1Q8NF37 534 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 P3H4Q92791 437 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 GIMAP5Q96F15 307 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 C16orf45Q96MC5 204 aaPredicted RBP8.36□□□□□ -1.07
GPC6-202ENST00000617456 TIMM29Q9BSF4 260 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 GLOD4Q9HC38 313 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 LHX9Q9NQ69 397 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 ACSS2Q9NR19 701 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 PCMTD2Q9NV79 361 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 FAM153AQ9UHL3 310 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 ADGRG1Q9Y653 693 aa8.36□□□□□ -1.07
GPC6-202ENST00000617456 KMOO15229 486 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 SMIM24O75264 130 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 SORBS2O94875 1100 aaKnown RBP8.35□□□□□ -1.07
GPC6-202ENST00000617456 SLC25A14O95258 325 aaPredicted RBP8.35□□□□□ -1.07
GPC6-202ENST00000617456 TIAF1O95411 115 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 VIPP01282 170 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 C9P02748 559 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 KRT1P04264 644 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 PYGMP11217 842 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 VCLP18206 1134 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 HLA-DPA1P20036 260 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 COMTP21964 271 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 PTPN3P26045 913 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 PTPN7P35236 360 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 CYLC1P35663 651 aaPredicted RBP8.35□□□□□ -1.07
GPC6-202ENST00000617456 GJC1P36383 396 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 SERPINB8P50452 374 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 UBE2IP63279 158 aaKnown RBP8.35□□□□□ -1.07
GPC6-202ENST00000617456 MRPS25P82663 173 aaKnown RBP8.35□□□□□ -1.07
GPC6-202ENST00000617456 TRAP1Q12931 704 aaKnown RBP8.35□□□□□ -1.07
GPC6-202ENST00000617456 IL11RAQ14626 422 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 WHAMMP3Q1A5X7 153 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 ZNF569Q5MCW4 686 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 ZNF648Q5T619 568 aaPredicted RBP8.35□□□□□ -1.07
GPC6-202ENST00000617456 CACHD1Q5VU97 1274 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 CYB5D1Q6P9G0 228 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 FAM199XQ6PEV8 388 aaPredicted RBP8.35□□□□□ -1.07
GPC6-202ENST00000617456 CRTC3Q6UUV7 619 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 ABRAXAS1Q6UWZ7 409 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 MFSD7Q6UXD7 560 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 TMEM26Q6ZUK4 368 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 ZNF554Q86TJ5 538 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 RFX6Q8HWS3 928 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 TMTC1Q8IUR5 882 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 SCAIQ8N9R8 606 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 TC2NQ8N9U0 490 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 GLYATL1Q969I3 302 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms