RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ATP6V0D1P61421 351 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 TRIP6Q15654 476 aaKnown RBP15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 RSPO4Q2I0M5 234 aaPredicted RBP15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 FAM83EQ2M2I3 478 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 CCSMST1Q4G0I0 132 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 ZNF438Q7Z4V0 828 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 CENPLQ8N0S6 344 aaPredicted RBP15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 OR52E1Q8NGJ3 308 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 IFI44Q8TCB0 444 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 MAGEC3Q8TD91 643 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 ACMSDQ8TDX5 336 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 ANKRD7Q92527 254 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 RAD51AP1Q96B01 352 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 RUFY1Q96T51 708 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 NRTNQ99748 197 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 TBC1D10AQ9BXI6 508 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 CENPHQ9H3R5 247 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 UCK1Q9HA47 277 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 PARVBQ9HBI1 364 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 ZNF358Q9NW07 568 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 PDE10AQ9Y233 779 aa15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 GOLGA4Q13439 2230 aaKnown RBP15.19■□□□□ 0.02
PCDHGC3-204ENST00000617222 ZFC3H1O60293 1989 aaKnown RBP15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 KRT87PA6NCN2 255 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 B4GAT1O43505 415 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 SYF2O95926 243 aaKnown RBP15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 TOP3BO95985 862 aaKnown RBP15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 TPBGLP0DKB5 382 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 COL6A2P12110 1019 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 PNLIPP16233 465 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 CYP2A7P20853 494 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 CSRP1P21291 193 aaKnown RBP15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 ACP1P24666 158 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 GPR3P46089 330 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 SP140Q13342 867 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 PLCL1Q15111 1095 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 TSNQ15631 228 aaKnown RBP15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 PHKG1Q16816 387 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 CCDC157Q569K6 752 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 TRABD2AQ86V40 505 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 FBXO15Q8NCQ5 510 aaPredicted RBP15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 OR4E2Q8NGC2 313 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 MCOLN3Q8TDD5 553 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 LCN9Q8WX39 176 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 PTERQ96BW5 349 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 TSNARE1Q96NA8 513 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 GPR78Q96P69 363 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 PKP4Q99569 1192 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 CCDC3Q9BQI4 270 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 TFB2MQ9H5Q4 396 aaKnown RBP15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 XKR8Q9H6D3 395 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 KCNK4Q9NYG8 393 aa15.18■□□□□ 0.02
PCDHGC3-204ENST00000617222 LILRA5A6NI73 299 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 HIST1H2AGP0C0S8 130 aaPredicted RBP15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 MYZAPP0CAP1 466 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 TFEBP19484 476 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 HIST1H2ADP20671 130 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 GLRBP48167 497 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 KCNC1P48547 511 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 PPM1FP49593 454 aaPredicted RBP15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 ACADVLP49748 655 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 GRB7Q14451 532 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 NR1D2Q14995 579 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 OR4D1Q15615 310 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 AMZ1Q400G9 498 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 NKAIN2Q5VXU1 208 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 SBSNQ6UWP8 590 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 SH2D5Q6ZV89 423 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 CLEC14AQ86T13 490 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 ISCA2Q86U28 154 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 C4orf33Q8N1A6 199 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 OR9A1PQ8NGU1 263 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 KIAA1191Q96A73 305 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 SCYL1Q96KG9 808 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 HIST1H2AHQ96KK5 128 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 IL17FQ96PD4 163 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 HIST1H2AJQ99878 128 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 H2AFJQ9BTM1 129 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 TRIM54Q9BYV2 358 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 SRMSQ9H3Y6 488 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 ALG9Q9H6U8 611 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 UTP6Q9NYH9 597 aaKnown RBP15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 NOVA2Q9UNW9 492 aaKnown RBP15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 ICKQ9UPZ9 632 aa15.17■□□□□ 0.02
PCDHGC3-204ENST00000617222 FRYLO94915 3013 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 SPAARA0A1B0GVQ0 90 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 PABPN1LA6NDY0 278 aaKnown RBP15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 AGPSO00116 658 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 MYO1CO00159 1063 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 CASC3O15234 703 aaKnown RBP15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 ZW10O43264 779 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 KDM1AO60341 852 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 GUCA1CO95843 209 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 TYRP1P17643 537 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 AMD1P17707 334 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 KRT4P19013 534 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 CCL7P80098 99 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 SLC18A2Q05940 514 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms