RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 IL17RCQ8NAC3 791 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 FAR2Q96K12 515 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 HIST1H2AHQ96KK5 128 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 HIST1H2AJQ99878 128 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 H2AFJQ9BTM1 129 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 PARVBQ9HBI1 364 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 FBXL12Q9NXK8 326 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 SLC23A2Q9UGH3 650 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 PLAGL1Q9UM63 463 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 CA5BQ9Y2D0 317 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 HNRNPCL1O60812 293 aaKnown RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 ATG13O75143 517 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 KLF8O95600 359 aaPredicted RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 CTHP32929 405 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 ELP6Q0PNE2 266 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 PRKG2Q13237 762 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 ART3Q13508 389 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 HTR4Q13639 388 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 RPS6KA2Q15349 733 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 FAM83HQ6ZRV2 1179 aaPredicted RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 FRMD1Q8N878 549 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 KYQ8NBH2 561 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 RP9Q8TA86 221 aaKnown RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 PYDC1Q8WXC3 89 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 C1QTNF3Q9BXJ4 246 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 SLC12A9Q9BXP2 914 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 KCNK12Q9HB15 430 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 MRPL40Q9NQ50 206 aaKnown RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 SMOXQ9NWM0 555 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 SLAMF8Q9P0V8 285 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 ZFR2Q9UPR6 939 aaKnown RBP7.61□□□□□ -1.19
NEK3-207ENST00000617054 PIAS3Q9Y6X2 628 aa7.61□□□□□ -1.19
NEK3-207ENST00000617054 K7EPI3 171 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 SLC31A1O15431 190 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 POP7O75817 140 aaKnown RBP7.6□□□□□ -1.19
NEK3-207ENST00000617054 SLC16A8O95907 504 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 FUCA1P04066 466 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 EPB42P16452 691 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 GPX3P22352 226 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 NFKBIAP25963 317 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 HMOX2P30519 316 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 CAPRIN1Q14444 709 aaKnown RBP7.6□□□□□ -1.19
NEK3-207ENST00000617054 RCN1Q15293 331 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 CCDC6Q16204 474 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 LDLRAP1Q5SW96 308 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 SULT1C3Q6IMI6 304 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 RETREG3Q86VR2 466 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 ATCAYQ86WG3 371 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 SUGP1Q8IWZ8 645 aaKnown RBP7.6□□□□□ -1.19
NEK3-207ENST00000617054 PIP4P2Q8N4L2 257 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 CLHC1Q8NHS4 586 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 ZNF382Q96SR6 550 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 CCM2Q9BSQ5 444 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 RTKNQ9BST9 563 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 C1orf21Q9H246 121 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 MOSPD1Q9UJG1 213 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 PLXNA2O75051 1894 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 NUP214P35658 2090 aaPredicted RBP7.6□□□□□ -1.19
NEK3-207ENST00000617054 MUC22E2RYF6 1773 aaPredicted RBP7.6□□□□□ -1.19
NEK3-207ENST00000617054 TBC1D3DA0A087WVF3 549 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 TBC1D3IA0A087WXS9 549 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 TBC1D3EA0A087X179 549 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 TBC1D3KA0A087X1G2 549 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 TBC1D3FA6NER0 549 aaPredicted RBP7.6□□□□□ -1.19
NEK3-207ENST00000617054 TBC1D3LB9A6J9 549 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 H0Y858 1186 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 NUAK1O60285 661 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 RSL1D1O76021 490 aaKnown RBP7.6□□□□□ -1.19
NEK3-207ENST00000617054 TBC1D3HP0C7X1 549 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 LBPP18428 481 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 ILF2Q12905 390 aaKnown RBP7.6□□□□□ -1.19
NEK3-207ENST00000617054 NAE1Q13564 534 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 DNAL1Q4LDG9 190 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 TBCELQ5QJ74 424 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 C6orf136Q5SQH8 315 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 TBC1D3GQ6DHY5 549 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 TBC1D3CQ6IPX1 549 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 SUSD1Q6UWL2 747 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 DSG4Q86SJ6 1040 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 TBC1D3Q8IZP1 549 aaPredicted RBP7.6□□□□□ -1.19
NEK3-207ENST00000617054 ASB2Q96Q27 587 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 C19orf43Q9BQ61 176 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 ACTR8Q9H981 624 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 WDR41Q9HAD4 459 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 ADA2Q9NZK5 511 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 ZNF490Q9ULM2 529 aaPredicted RBP7.6□□□□□ -1.19
NEK3-207ENST00000617054 PLEKHM1Q9Y4G2 1056 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 TNPO3Q9Y5L0 923 aaKnown RBP7.6□□□□□ -1.19
NEK3-207ENST00000617054 A0A1W2PQF6 199 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 H3BM21 787 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 GFYI3L273 518 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 SLCO2B1O94956 709 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 CHEK2O96017 543 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 OTCP00480 354 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 FTH1P02794 183 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 G6PDP11413 515 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 CAPN3P20807 821 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 PRLHRP49683 370 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 THOP1P52888 689 aa7.6□□□□□ -1.19
NEK3-207ENST00000617054 RPS14P62263 151 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms