RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 FNDC8Q8TC99 324 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 TMEM209Q96SK2 561 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 TTYH3Q9C0H2 523 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 MUC3BQ9H195 1237 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 NFASCO94856 1347 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 OPLAHO14841 1288 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 SNX3O60493 162 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 SOX30O94993 753 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 CYB5AP00167 134 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 NELFEP18615 380 aaKnown RBP9.13□□□□□ -0.95
COL12A1-211ENST00000615798 CES1P23141 567 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 HNF1BP35680 557 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 DPP6P42658 865 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 C21orf62-AS1Q17RA5 79 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 LMAN2LQ9H0V9 348 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 COMMD3Q9UBI1 195 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 SCP2D1Q9UJQ7 156 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 CRYL1Q9Y2S2 319 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 OR6C74A6NCV1 312 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 FKTNO75072 461 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 SLITRK3O94933 977 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 STAG3L2P0CL84 134 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 INSCQ1MX18 579 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 DUPD1Q68J44 220 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 Q8N402 240 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 ZFP28Q8NHY6 868 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 ATP13A3Q9H7F0 1226 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 FOLH1BQ9HBA9 442 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 USP29Q9HBJ7 922 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 SCUBE2Q9NQ36 999 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 ADAM18Q9Y3Q7 739 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 WASF2Q9Y6W5 498 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 KCNK2O95069 426 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 ALDH1A1P00352 501 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 CYBBP04839 570 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 SUPT20HL2P0C7V6 817 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 HLA-FP30511 346 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 KCNJ1P48048 391 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 PDK4Q16654 411 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 CYP20A1Q6UW02 462 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 SMARCD1Q96GM5 515 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 HPDLQ96IR7 371 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 VRK1Q99986 396 aaPredicted RBP9.13□□□□□ -0.95
COL12A1-211ENST00000615798 PAQR5Q9NXK6 330 aaPredicted RBP9.13□□□□□ -0.95
COL12A1-211ENST00000615798 SCN2AQ99250 2005 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 CRATP43155 626 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 TKTL1P51854 596 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 RANP62826 216 aaKnown RBP9.13□□□□□ -0.95
COL12A1-211ENST00000615798 DCSTAMPQ9H295 470 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 MT-CO2P00403 227 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 ALPPP05187 535 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 G0S2P27469 103 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 SLC26A5P58743 744 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 PPIGQ13427 754 aaKnown RBP eCLIP9.13□□□□□ -0.95
COL12A1-211ENST00000615798 FAM109AQ8N4B1 249 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 SHC3Q92529 594 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 PABPC5Q96DU9 382 aaKnown RBP9.13□□□□□ -0.95
COL12A1-211ENST00000615798 SCRN2Q96FV2 425 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 MGAT4CQ9UBM8 478 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 ANKUB1A6NFN9 424 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 ISM1B1AKI9 464 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 HOXA2O43364 376 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 CAPN3P20807 821 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 MADCAM1Q13477 382 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 KLHL22Q53GT1 634 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 UBE2R2Q712K3 238 aaPredicted RBP9.13□□□□□ -0.95
COL12A1-211ENST00000615798 RDH11Q8TC12 318 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 C2orf49Q9BVC5 232 aaPredicted RBP9.13□□□□□ -0.95
COL12A1-211ENST00000615798 SLC5A7Q9GZV3 580 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 AGO4Q9HCK5 861 aaKnown RBP9.13□□□□□ -0.95
COL12A1-211ENST00000615798 USP18Q9UMW8 372 aa9.13□□□□□ -0.95
COL12A1-211ENST00000615798 TOR1BO14657 336 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 JUPP14923 745 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 SLC25A3Q00325 362 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 BAATQ14032 418 aaPredicted RBP9.12□□□□□ -0.95
COL12A1-211ENST00000615798 AMZ1Q400G9 498 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 GTPBP8Q8N3Z3 284 aaPredicted RBP9.12□□□□□ -0.95
COL12A1-211ENST00000615798 OR56B2PQ8NGI1 322 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 IFI44Q8TCB0 444 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 KAT5Q92993 513 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 CENPNQ96H22 339 aaPredicted RBP9.12□□□□□ -0.95
COL12A1-211ENST00000615798 PCDHGB1Q9Y5G3 927 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 A0A088AWK7 358 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 LRP5LA4QPB2 252 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 CLN5O75503 358 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 ZNF10P21506 573 aaPredicted RBP9.12□□□□□ -0.95
COL12A1-211ENST00000615798 ADORA2BP29275 332 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 RARRES1P49788 294 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 RPL13AP3Q6NVV1 102 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 SERPINA13PQ6UXR4 307 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 LRP10Q7Z4F1 713 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 CPNE2Q96FN4 548 aaPredicted RBP9.12□□□□□ -0.95
COL12A1-211ENST00000615798 KCNH4Q9UQ05 1017 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 LILRB5O75023 590 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 CYP2A7P20853 494 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 STARD3Q14849 445 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 TIGD6Q17RP2 521 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 GPR65Q8IYL9 337 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 ACTR6Q9GZN1 396 aa9.12□□□□□ -0.95
COL12A1-211ENST00000615798 HACL1Q9UJ83 578 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms