RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 FAM95CA0A1B0GW59 222 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 FAM25AB3EWG3 89 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 FAM25CB3EWG5 89 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 FAM25GB3EWG6 89 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 TRIM24O15164 1050 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 ZW10O43264 779 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 CACNG3O60359 315 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 VAPBO95292 243 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 PEX11BO96011 259 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 BMP2P12643 396 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 STMN1P16949 149 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 PKNOX1P55347 436 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 RAB10P61026 200 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 MPP1Q00013 466 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 IFITM3Q01628 133 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 VAC14Q08AM6 782 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 ILF2Q12905 390 aaKnown RBP12.83□□□□□ -0.36
FOXN3-219ENST00000615335 CTBP1Q13363 440 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 HTR4Q13639 388 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 RUNX3Q13761 415 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 POU6F1Q14863 301 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 NEDD8Q15843 81 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 PLEKHG6Q3KR16 790 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 MTX3Q5HYI7 312 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.83□□□□□ -0.36
FOXN3-219ENST00000615335 INTS11Q5TA45 600 aaKnown RBP12.83□□□□□ -0.36
FOXN3-219ENST00000615335 RSBN1Q5VWQ0 802 aaPredicted RBP12.83□□□□□ -0.36
FOXN3-219ENST00000615335 ASTLQ6HA08 431 aaPredicted RBP12.83□□□□□ -0.36
FOXN3-219ENST00000615335 LINGO4Q6UY18 593 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 ZBTB46Q86UZ6 589 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 DENND6AQ8IWF6 608 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 KLHDC8BQ8IXV7 354 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 CPA6Q8N4T0 437 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 CCNYL1Q8N7R7 359 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 NXNL1Q96CM4 212 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 ZNF419Q96HQ0 510 aaPredicted RBP12.83□□□□□ -0.36
FOXN3-219ENST00000615335 MARK4Q96L34 752 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 IL12RB2Q99665 862 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 ADI1Q9BV57 179 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 PHF7Q9BWX1 381 aaPredicted RBP12.83□□□□□ -0.36
FOXN3-219ENST00000615335 BRD9Q9H8M2 597 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 WDR41Q9HAD4 459 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 EFCAB1Q9HAE3 211 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 PDFQ9HBH1 243 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 ZBTB26Q9HCK0 441 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 FBXO8Q9NRD0 319 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 GIMAP4Q9NUV9 329 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 NPAP1Q9NZP6 1156 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 MAU2Q9Y6X3 613 aa12.83□□□□□ -0.36
FOXN3-219ENST00000615335 ANHXE9PGG2 379 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 ANXA9O76027 345 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 PTGS2P35354 604 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 ARF5P84085 180 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 ITKQ08881 620 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 MERTKQ12866 999 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 ZNF460Q14592 562 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 PITRM1Q5JRX3 1037 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 CNTN4Q8IWV2 1026 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 DCAF4L2Q8NA75 395 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 PPHLN1Q8NEY8 458 aaKnown RBP12.82□□□□□ -0.36
FOXN3-219ENST00000615335 IPMKQ8NFU5 416 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 BRSK1Q8TDC3 778 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 FATE1Q969F0 183 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 PBXIP1Q96AQ6 731 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 ZNF599Q96NL3 588 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 MKRN2Q9H000 416 aaKnown RBP12.82□□□□□ -0.36
FOXN3-219ENST00000615335 NT5MQ9NPB1 228 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 SMOXQ9NWM0 555 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 LIMD1Q9UGP4 676 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 ZNF221Q9UK13 617 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 INTS6Q9UL03 887 aaKnown RBP12.82□□□□□ -0.36
FOXN3-219ENST00000615335 CAB39Q9Y376 341 aaPredicted RBP12.82□□□□□ -0.36
FOXN3-219ENST00000615335 MYO10Q9HD67 2058 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 TEX51A0A1B0GUA7 166 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 NPHS1O60500 1241 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 NADKO95544 446 aaPredicted RBP12.82□□□□□ -0.36
FOXN3-219ENST00000615335 MT-CYBP00156 380 aaPredicted RBP12.82□□□□□ -0.36
FOXN3-219ENST00000615335 JUNP05412 331 aaKnown RBP12.82□□□□□ -0.36
FOXN3-219ENST00000615335 HLA-DQB2P05538 268 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 SERPINB10P48595 397 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 DGKGP49619 791 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 TRAP1Q12931 704 aaKnown RBP12.82□□□□□ -0.36
FOXN3-219ENST00000615335 ZNF235Q14590 738 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 SLC36A3Q495N2 470 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 PTCRAQ6ISU1 281 aaPredicted RBP12.82□□□□□ -0.36
FOXN3-219ENST00000615335 ESRP1Q6NXG1 681 aaKnown RBP12.82□□□□□ -0.36
FOXN3-219ENST00000615335 ZNF773Q6PK81 442 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 FKBP9P1Q75LS8 142 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 C12orf40Q86WS4 652 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 CEP97Q8IW35 865 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 GALNT6Q8NCL4 622 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 ELMO2Q96JJ3 720 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 LMLNQ96KR4 655 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 GPR78Q96P69 363 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 FCRL5Q96RD9 977 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 FICDQ9BVA6 458 aa12.82□□□□□ -0.36
FOXN3-219ENST00000615335 COPG1Q9Y678 874 aaKnown RBP12.82□□□□□ -0.36
FOXN3-219ENST00000615335 KIF26AQ9ULI4 1882 aaPredicted RBP12.82□□□□□ -0.36
FOXN3-219ENST00000615335 TRPC5OSA6NMA1 111 aa12.81□□□□□ -0.36
FOXN3-219ENST00000615335 TULP3O75386 442 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms