RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 TCEAL4Q96EI5 215 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 ASB16Q96NS5 453 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 NECTIN4Q96NY8 510 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 CYP2S1Q96SQ9 504 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 WDR83Q9BRX9 315 aaKnown RBP8.65□□□□□ -1.02
VPS11-206ENST00000614944 ZPBPQ9BS86 351 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 FEM1AQ9BSK4 669 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 POLR1EQ9GZS1 481 aaKnown RBP8.65□□□□□ -1.02
VPS11-206ENST00000614944 ACSS3Q9H6R3 686 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 MIA3Q5JRA6 1907 aa8.65□□□□□ -1.02
VPS11-206ENST00000614944 FAM237BA0A1B0GVD1 139 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 CENPXA8MT69 81 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 A8MUA0 341 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 GNB5O14775 395 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 SNAP91O60641 907 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 TBL1XO60907 577 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 NOL3O60936 208 aaKnown RBP8.65□□□□□ -1.03
VPS11-206ENST00000614944 TSC22D2O75157 780 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 C1QAP02745 245 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 PDGFAP04085 211 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 MMP2P08253 660 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 BRAFP15056 766 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 NFKB1P19838 968 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 MAOBP27338 520 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 HOXA6P31267 233 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 EIF2DP41214 584 aaKnown RBP8.65□□□□□ -1.03
VPS11-206ENST00000614944 SLC18A1P54219 525 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 GRSF1Q12849 480 aaKnown RBP eCLIP8.65□□□□□ -1.03
VPS11-206ENST00000614944 CDH17Q12864 832 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 PDIA2Q13087 525 aaKnown RBP8.65□□□□□ -1.03
VPS11-206ENST00000614944 LTB4RQ15722 352 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 GRASPQ7Z6J2 395 aaPredicted RBP8.65□□□□□ -1.03
VPS11-206ENST00000614944 OR52N1Q8NH53 320 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 ZNF420Q8TAQ5 688 aaPredicted RBP8.65□□□□□ -1.03
VPS11-206ENST00000614944 PYDC1Q8WXC3 89 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 SMARCD2Q92925 531 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 RAB7BQ96AH8 199 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 CELF6Q96J87 481 aaKnown RBP8.65□□□□□ -1.03
VPS11-206ENST00000614944 RPF2Q9H7B2 306 aaKnown RBP8.65□□□□□ -1.03
VPS11-206ENST00000614944 SSU72Q9NP77 194 aaKnown RBP8.65□□□□□ -1.03
VPS11-206ENST00000614944 SAYSD1Q9NPB0 183 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 ABCB8Q9NUT2 735 aa8.65□□□□□ -1.03
VPS11-206ENST00000614944 RBM22Q9NW64 420 aaKnown RBP eCLIP8.65□□□□□ -1.03
VPS11-206ENST00000614944 MRPS23Q9Y3D9 190 aaKnown RBP8.65□□□□□ -1.03
VPS11-206ENST00000614944 POM121CA8CG34 1229 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 CLDN25C9JDP6 229 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 PLOD2O00469 737 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 BRINP1O60477 761 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 TM7SF2O76062 418 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 JCHAINP01591 159 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 C7P10643 843 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 KELP23276 732 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 F8A1P23610 371 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 FOXN2P32314 431 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 SGSHP51688 502 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 RNF4P78317 190 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 VAC14Q08AM6 782 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 ERAP2Q6P179 960 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 SYCE2Q6PIF2 218 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 UTS2BQ765I0 119 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 TMEM135Q86UB9 458 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 TMPRSS6Q8IU80 811 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 NPAS3Q8IXF0 933 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 DEPDC1BQ8WUY9 529 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 IRF7Q92985 503 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 ELSPBP1Q96BH3 223 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 DCUN1D1Q96GG9 259 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 MSLNLQ96KJ4 702 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 KIFC1Q9BW19 673 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 TFB2MQ9H5Q4 396 aaKnown RBP8.64□□□□□ -1.03
VPS11-206ENST00000614944 CPNE5Q9HCH3 593 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 SPHK2Q9NRA0 654 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 PKD2L2Q9NZM6 624 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 HS3ST2Q9Y278 367 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 KCNE2Q9Y6J6 123 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 CCDC78A2IDD5 438 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 DBX1A6NMT0 343 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 GSRP00390 522 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 APRTP07741 180 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 HLA-DPA1P20036 260 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 CD247P20963 164 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 FCARP24071 287 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 CASP3P42574 277 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 GPX6P59796 221 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 RPS24P62847 133 aaKnown RBP8.64□□□□□ -1.03
VPS11-206ENST00000614944 GRM3Q14832 879 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 NCF4Q15080 339 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 FGD3Q5JSP0 725 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 MACC1Q6ZN28 852 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 ADCK1Q86TW2 530 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 KCT2Q8NC54 265 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 ZNF419Q96HQ0 510 aaPredicted RBP8.64□□□□□ -1.03
VPS11-206ENST00000614944 RIPOR3Q96MK2 946 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 TBL1YQ9BQ87 522 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 IFT46Q9NQC8 304 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 ENTPD4Q9Y227 616 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 BRCA2P51587 3418 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 A0A0G2JMP0 313 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 A0A0X1KG70 313 aa8.64□□□□□ -1.03
VPS11-206ENST00000614944 FAM159BA6NKW6 160 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms