RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 NKAPLQ5M9Q1 402 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 ZNF425Q6IV72 752 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 UGT2A3Q6UWM9 527 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 SERPINA13PQ6UXR4 307 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 MAP4K3Q8IVH8 894 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 NKX2-3Q8TAU0 364 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 COQ10AQ96MF6 247 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 C14orf119Q9NWQ9 140 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 ACTR10Q9NZ32 417 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 COQ3Q9NZJ6 369 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 ATRNO75882 1429 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 LAMB1P07942 1786 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 MAGEB17A8MXT2 336 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 LRRN3E7EW58 273 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 SSX4O60224 188 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 RARRES1P49788 294 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 POLR2LP62875 67 aaKnown RBP13.53□□□□□ -0.24
CHD1-212ENST00000614616 HERVK_113P63132 956 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 WNT8BQ93098 351 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 RAD51AP1Q96B01 352 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 PTERQ96BW5 349 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 ERVK-6Q9BXR3 956 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 LRRN3Q9H3W5 708 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 MGAT4CQ9UBM8 478 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 NOP16Q9Y3C1 178 aaKnown RBP13.53□□□□□ -0.24
CHD1-212ENST00000614616 H2AFB2P0C5Z0 115 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 TBX4P57082 545 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 NCS1P62166 190 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 DESI1Q6ICB0 168 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 GRHL2Q6ISB3 625 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 CNDP2Q96KP4 475 aaKnown RBP13.53□□□□□ -0.24
CHD1-212ENST00000614616 ACP6Q9NPH0 428 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 CLDN9O95484 217 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 PAK4O96013 591 aaPredicted RBP13.53□□□□□ -0.24
CHD1-212ENST00000614616 KCNJ8Q15842 424 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 NCSTNQ92542 709 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 RNF31Q96EP0 1072 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 ZNF649Q9BS31 505 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 FUNDC2Q9BWH2 189 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 LHX5Q9H2C1 402 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 VPS28Q9UK41 221 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 PEAK1Q9H792 1746 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 CREBL2O60519 120 aaPredicted RBP13.53□□□□□ -0.24
CHD1-212ENST00000614616 CXCL8P10145 99 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 RYKP34925 604 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 TCF7P36402 384 aaPredicted RBP13.53□□□□□ -0.24
CHD1-212ENST00000614616 MC2RQ01718 297 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 GBE1Q04446 702 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 HNRNPA0Q13151 305 aaKnown RBP13.53□□□□□ -0.24
CHD1-212ENST00000614616 IFI44LQ53G44 452 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 ZC3H12AQ5D1E8 599 aaKnown RBP13.53□□□□□ -0.24
CHD1-212ENST00000614616 TAPT1Q6NXT6 567 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 SPARTQ8N0X7 666 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 CARNMT1Q8N4J0 409 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 ANKFN1Q8N957 763 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 OR5T2Q8NGG2 359 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 INTS7Q9NVH2 962 aaKnown RBP13.53□□□□□ -0.24
CHD1-212ENST00000614616 CYP27B1O15528 508 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 SH3BGRLO75368 114 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 ICAM3P32942 547 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 PPP4CP60510 307 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 MPP7Q5T2T1 576 aa13.53□□□□□ -0.24
CHD1-212ENST00000614616 ZC3HC1Q86WB0 502 aaKnown RBP13.53□□□□□ -0.24
CHD1-212ENST00000614616 PKLRP30613 574 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 PRKAG1P54619 331 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 CLCQ05315 142 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 TMEM62Q0P6H9 643 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 GTF2H2Q13888 395 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 GTF2H2CQ6P1K8 395 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 TRMT11Q7Z4G4 463 aaKnown RBP13.52□□□□□ -0.24
CHD1-212ENST00000614616 CADM2Q8N3J6 435 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 OR4K3Q96R72 315 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 TAS2R10Q9NYW0 307 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 ZNRF3Q9ULT6 936 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 PIP5K1BO14986 540 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 FOXD2O60548 495 aaPredicted RBP13.52□□□□□ -0.24
CHD1-212ENST00000614616 ARP10275 920 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 UBA1P22314 1058 aaKnown RBP13.52□□□□□ -0.24
CHD1-212ENST00000614616 MMP8P22894 467 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 CTBP2P56545 445 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 ZMYND11Q15326 602 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 AGMOQ6ZNB7 445 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 DENND1CQ8IV53 801 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 MFSD8Q8NHS3 518 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 EDEM1Q92611 657 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 NUSAP1Q9BXS6 441 aaKnown RBP13.52□□□□□ -0.24
CHD1-212ENST00000614616 ATP13A3Q9H7F0 1226 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 EIF2B4Q9UI10 523 aaKnown RBP13.52□□□□□ -0.24
CHD1-212ENST00000614616 NEURL4Q96JN8 1562 aa13.52□□□□□ -0.24
CHD1-212ENST00000614616 ALDH3B2P48448 385 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 HLCSP50747 726 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 ARSFP54793 590 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 LRRC66Q68CR7 880 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 CLEC10AQ8IUN9 316 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 APOBEC3FQ8IUX4 373 aaKnown RBP13.52□□□□□ -0.25
CHD1-212ENST00000614616 ZNF780BQ9Y6R6 833 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 ABHD14A-ACY1A0A1B0GW23 586 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 GBX2P52951 348 aaPredicted RBP13.52□□□□□ -0.25
CHD1-212ENST00000614616 SNRPD2P62316 118 aaKnown RBP13.52□□□□□ -0.25
CHD1-212ENST00000614616 EFEMP1Q12805 493 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms