RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PPP3R2Q96LZ3 170 aa14.4□□□□□ -0.1
CDH1-213ENST00000612417 CLPBQ9H078 707 aa14.4□□□□□ -0.1
CDH1-213ENST00000612417 SLC28A3Q9HAS3 691 aa14.4□□□□□ -0.1
CDH1-213ENST00000612417 USP22Q9UPT9 525 aa14.4□□□□□ -0.1
CDH1-213ENST00000612417 C5orf42Q9H799 3197 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 A0A0U1RQS6 177 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 ZSCAN9O15535 394 aaPredicted RBP14.39□□□□□ -0.11
CDH1-213ENST00000612417 PGLSO95336 258 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 TYRP14679 529 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 RPL10P27635 214 aaKnown RBP14.39□□□□□ -0.11
CDH1-213ENST00000612417 HLA-FP30511 346 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 TTKP33981 857 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 CTSOP43234 321 aaPredicted RBP14.39□□□□□ -0.11
CDH1-213ENST00000612417 RGS4P49798 205 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 ABRAXAS2Q15018 415 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 AP5B1Q2VPB7 878 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 PYCR3Q53H96 274 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 LY6G5CQ5SRR4 150 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 ARMC12Q5T9G4 340 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 RBFAQ8N0V3 343 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 PIH1D2Q8WWB5 315 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 MYO19Q96H55 970 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 FBXL20Q96IG2 436 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 APOL5Q9BWW9 433 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 CIPCQ9C0C6 399 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 IPPKQ9H8X2 491 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 GNPTGQ9UJJ9 305 aa14.39□□□□□ -0.11
CDH1-213ENST00000612417 INTS6Q9UL03 887 aaKnown RBP14.39□□□□□ -0.11
CDH1-213ENST00000612417 TRBV5-4A0A0C4DH59 114 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 POU2F2P09086 479 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 GGT1P19440 569 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 RAB30Q15771 203 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 C18orf21Q32NC0 220 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 RFTN2Q52LD8 501 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 PTRHD1Q6GMV3 140 aaKnown RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 SNX20Q7Z614 316 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 SERPINA9Q86WD7 417 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 NAT16Q8N8M0 369 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 UBTD2Q8WUN7 234 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 GFM2Q969S9 779 aaKnown RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 ISOC1Q96CN7 298 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 PPM1MQ96MI6 270 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 LMAN2LQ9H0V9 348 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 TNKS2Q9H2K2 1166 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 NSUN3Q9H649 340 aaKnown RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 SFXN1Q9H9B4 322 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 EVLQ9UI08 416 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 POLR3HQ9Y535 204 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 C2orf16Q68DN1 1984 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 EPOPA6NHQ4 379 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 RFXAPO00287 272 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 UPK1AO00322 258 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 SLC9A3R1O14745 358 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 TAPBPO15533 448 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 BNIP3LO60238 219 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 DEAF1O75398 565 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 RSL1D1O76021 490 aaKnown RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 PRAMEF1O95521 474 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 ANXA6P08133 673 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 RAP2AP10114 183 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 HMOX2P30519 316 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 ARL1P40616 181 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 STK19P49842 368 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 SFSWAPQ12872 951 aaKnown RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 MAD2L1Q13257 205 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 DCTN2Q13561 401 aaKnown RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 SELPLGQ14242 412 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 LRRC23Q53EV4 343 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 ASTLQ6HA08 431 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 MILR1Q7Z6M3 343 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 GPR180Q86V85 440 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 CELF5Q8N6W0 485 aaKnown RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 B4GALNT2Q8NHY0 566 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 ZNF420Q8TAQ5 688 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 PNPT1Q8TCS8 783 aaKnown RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 MIPOL1Q8TD10 442 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 MAGEE2Q8TD90 523 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 RNF145Q96MT1 663 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 SEPHS2Q99611 448 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 NPLQ9BXD5 320 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 FAM126AQ9BYI3 521 aaPredicted RBP14.38□□□□□ -0.11
CDH1-213ENST00000612417 GORASP2Q9H8Y8 452 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 NTN4Q9HB63 628 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 ELOVL2Q9NXB9 296 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 ASIC5Q9NY37 505 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 CIDEBQ9UHD4 219 aa14.38□□□□□ -0.11
CDH1-213ENST00000612417 WDR47O94967 919 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 KCNH1O95259 989 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 SNAP29O95721 258 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 DGKAP23743 735 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 WEE1P30291 646 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 VIPR2P41587 438 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 NUP107P57740 925 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 MTPNP58546 118 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 NFATC2Q13469 925 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 LYPLAL1Q5VWZ2 237 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 METTL3Q86U44 580 aaKnown RBP14.37□□□□□ -0.11
CDH1-213ENST00000612417 RALGPS2Q86X27 583 aaPredicted RBP14.37□□□□□ -0.11
CDH1-213ENST00000612417 ADGRG2Q8IZP9 1017 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 GLB1L3Q8NCI6 653 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms