RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 WFDC5Q8TCV5 224 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 ELMO1Q92556 727 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 ISG20Q96AZ6 181 aaKnown RBP13.76□□□□□ -0.21
COL6A1-207ENST00000612273 APOLD1Q96LR9 279 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 XIRP2A4UGR9 3374 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 CDH23Q9H251 3354 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 M0R3G1 203 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 PER2O15055 1255 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 CREG1O75629 220 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 CLPXO76031 633 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 VNN2O95498 520 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 PRKAR2AP13861 404 aaKnown RBP13.76□□□□□ -0.21
COL6A1-207ENST00000612273 TTKP33981 857 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 GNPDA1P46926 289 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 SLC11A1P49279 550 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 DGKEP52429 567 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 PHC1P78364 1004 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 RELAQ04206 551 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 SLC14A1Q13336 389 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 CACHD1Q5VU97 1274 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 TTC23Q5W5X9 447 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 TPGS1Q6ZTW0 290 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 NECAB2Q7Z6G3 386 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 TSPAN33Q86UF1 283 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 EID3Q8N140 333 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 ZNF548Q8NEK5 533 aaPredicted RBP13.76□□□□□ -0.21
COL6A1-207ENST00000612273 ZNF420Q8TAQ5 688 aaPredicted RBP13.76□□□□□ -0.21
COL6A1-207ENST00000612273 MCOLN3Q8TDD5 553 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 SELENOMQ8WWX9 145 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 SACM1LQ9NTJ5 587 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 ARL15Q9NXU5 204 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 DNAJB9Q9UBS3 223 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 CD84Q9UIB8 345 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 ANKRD28O15084 1053 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 DCTP40126 519 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 BOP1Q14137 746 aaKnown RBP13.75□□□□□ -0.21
COL6A1-207ENST00000612273 COQ5Q5HYK3 327 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 ZCCHC8Q6NZY4 707 aaKnown RBP13.75□□□□□ -0.21
COL6A1-207ENST00000612273 DOK6Q6PKX4 331 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 C17orf99Q6UX52 265 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 ADAMTSL2Q86TH1 951 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 PDPRQ8NCN5 879 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 DBF4BQ8NFT6 615 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 ADAMTS16Q8TE57 1224 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 ZFP90Q8TF47 636 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 TPD52L3Q96J77 140 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 BBS2Q9BXC9 721 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 GPRC5BQ9NZH0 403 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL6A1-207ENST00000612273 TRIM64CA6NLI5 447 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 C16orf96A6NNT2 1141 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 KDELR3O43731 214 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 NADKO95544 446 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-207ENST00000612273 ANGPTL1O95841 491 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 ESR1P03372 595 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 PTGER3P43115 390 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 NCS1P62166 190 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 DSC1Q08554 894 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 MOGQ16653 247 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 SYT16Q17RD7 645 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 OR4F3Q6IEY1 312 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 KIAA1841Q6NSI8 718 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 FUT10Q6P4F1 479 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 DHRS4L2Q6PKH6 230 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 Q6ZPB1 254 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-207ENST00000612273 ANKS3Q6ZW76 656 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 ALDH16A1Q8IZ83 802 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 ARL10Q8N8L6 244 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 PAPD5Q8NDF8 572 aaKnown RBP13.75□□□□□ -0.21
COL6A1-207ENST00000612273 MYLIPQ8WY64 445 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 SLC22A12Q96S37 553 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 FAM126AQ9BYI3 521 aaPredicted RBP13.75□□□□□ -0.21
COL6A1-207ENST00000612273 ALOXE3Q9BYJ1 711 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 DHRS7Q9Y394 339 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 ORC6Q9Y5N6 252 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 SLC1A7O00341 560 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 BCKDKO14874 412 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 RGS14O43566 566 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 BCKDHAP12694 445 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 CYBAP13498 195 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 EIF2B2P49770 351 aaKnown RBP13.75□□□□□ -0.21
COL6A1-207ENST00000612273 CDH4P55283 916 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 CHRNA6Q15825 494 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 ZNF621Q6ZSS3 439 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 CEP68Q76N32 757 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 IL17CQ9P0M4 197 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 FNIP2Q9P278 1114 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 CDH7Q9ULB5 785 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 ABCG2Q9UNQ0 655 aa13.75□□□□□ -0.21
COL6A1-207ENST00000612273 USP34Q70CQ2 3546 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 TULP3O75386 442 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 STC2O76061 302 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 ZNF7P17097 686 aaPredicted RBP13.74□□□□□ -0.21
COL6A1-207ENST00000612273 CR2P20023 1033 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 CDH3P22223 829 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 S100A3P33764 101 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 CDH18Q13634 790 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 CYP27C1Q4G0S4 372 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 TTC30BQ8N4P2 665 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 OR7A2PQ8NGA2 310 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms