RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CAND1Q86VP6 1230 aaKnown RBP11.96□□□□□ -0.49
CBWD3-208ENST00000612050 GPR135Q8IZ08 494 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 KRT222Q8N1A0 295 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 D2HGDHQ8N465 521 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 NAT8LQ8N9F0 302 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 BBOF1Q8ND07 529 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 SEC14L1Q92503 715 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 SLC39A7Q92504 469 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 PMEPA1Q969W9 287 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 RAD51AP1Q96B01 352 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 KCND1Q9NSA2 647 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 IRAK4Q9NWZ3 460 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.96□□□□□ -0.49
CBWD3-208ENST00000612050 RALYQ9UKM9 306 aaKnown RBP11.96□□□□□ -0.49
CBWD3-208ENST00000612050 PADI1Q9ULC6 663 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 CRYL1Q9Y2S2 319 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 PCDHGA4Q9Y5G9 962 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 WDFY3Q8IZQ1 3526 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 PKD1L2Q7Z442 2459 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 SDK2Q58EX2 2172 aa11.96□□□□□ -0.5
CBWD3-208ENST00000612050 BPTFQ12830 3046 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 PABPN1LA6NDY0 278 aaKnown RBP11.95□□□□□ -0.5
CBWD3-208ENST00000612050 SLC9B1P1A6NJY1 282 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 IQCF5A8MTL0 148 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 GOLGA8KD6RF30 607 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 GOLGA8TH3BQL2 631 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 GPC4O75487 556 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 SCRG1O75711 98 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 HBQ1P09105 142 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 EBLN1P0CF75 366 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 PKMP14618 531 aaKnown RBP11.95□□□□□ -0.5
CBWD3-208ENST00000612050 CYP2A7P20853 494 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 ACADLP28330 430 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 RAB28P51157 221 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 PPP1CAP62136 330 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 ABRQ12979 859 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 KIR2DS3Q14952 304 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 NAA25Q14CX7 972 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 MORF4L2Q15014 288 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 ZNF658BQ4V348 819 aaPredicted RBP11.95□□□□□ -0.5
CBWD3-208ENST00000612050 RNASEH2BQ5TBB1 312 aaKnown RBP11.95□□□□□ -0.5
CBWD3-208ENST00000612050 UGT3A1Q6NUS8 523 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 SPESP1Q6UW49 350 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 NAPRTQ6XQN6 538 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 TMEM135Q86UB9 458 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 CILP2Q8IUL8 1156 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 P2RY12Q9H244 342 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 XKR8Q9H6D3 395 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 FAM114A2Q9NRY5 505 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 PYCARDQ9ULZ3 195 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 BTRCQ9Y297 605 aa11.95□□□□□ -0.5
CBWD3-208ENST00000612050 ZNF839A8K0R7 811 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 BHMG1C9JSJ3 638 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-208ENST00000612050 BTN3A3O00478 584 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 SLCO2B1O94956 709 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 DLGAP3O95886 979 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 CHRM5P08912 532 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-208ENST00000612050 LIFP15018 202 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 FOLR1P15328 257 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 TCN2P20062 427 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 ATP5DP30049 168 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 DLSTP36957 453 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 RPS15P62841 145 aaKnown RBP11.94□□□□□ -0.5
CBWD3-208ENST00000612050 CALCOCO2Q13137 446 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 KCNAB1Q14722 419 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 SPANXN3Q5MJ09 141 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 LRRC8EQ6NSJ5 796 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 UNC5AQ6ZN44 842 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 MAATS1Q7Z4T9 603 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 ZBTB2Q8N680 514 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 GALNT6Q8NCL4 622 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 LPGAT1Q92604 370 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 CLIP3Q96DZ5 547 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 TCTN2Q96GX1 697 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 SNF8Q96H20 258 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 SLC45A3Q96JT2 553 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 PPANQ9NQ55 473 aaKnown RBP11.94□□□□□ -0.5
CBWD3-208ENST00000612050 LATS2Q9NRM7 1088 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 ICKQ9UPZ9 632 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 NEU2Q9Y3R4 380 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 FAM208BQ5VWN6 2430 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 A0A0J9YY10 115 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 C21orf140B9A014 251 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 TMEM150CB9EJG8 249 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 E7EQ34 232 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 VPS26AO75436 327 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 KATNA1O75449 491 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 FKBP9O95302 570 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 S1PR4O95977 384 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 CATP04040 527 aaKnown RBP11.94□□□□□ -0.5
CBWD3-208ENST00000612050 MSL3P1P0C860 447 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 STAT5AP42229 794 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 ITGA1P56199 1179 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 ARL4CP56559 192 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 C19orf57Q0VDD7 668 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 GPR19Q15760 415 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 HIF1AQ16665 826 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 SLC5A12Q1EHB4 618 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 BBS9Q3SYG4 887 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 KIAA1614Q5VZ46 1190 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms