RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 SGTAO43765 313 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 CISD3P0C7P0 127 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 HSPA13P48723 471 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 HNMTP50135 292 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 ACOX1Q15067 660 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 CACHD1Q5VU97 1274 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 TMC5Q6UXY8 1006 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 ARPINQ7Z6K5 226 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 C7orf61Q8IZ16 206 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 LIX1Q8N485 282 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 MARVELD2Q8N4S9 558 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 DDHD1Q8NEL9 900 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 ST13P5Q8NFI4 369 aaPredicted RBP13.3□□□□□ -0.28
NEK3-205ENST00000610828 MCOLN3Q8TDD5 553 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 OSCP1Q8WVF1 389 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 SMG7Q92540 1137 aaKnown RBP13.3□□□□□ -0.28
NEK3-205ENST00000610828 RSPRY1Q96DX4 576 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 ZFYVE19Q96K21 471 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 UHRF1Q96T88 793 aaPredicted RBP13.3□□□□□ -0.28
NEK3-205ENST00000610828 ZBTB18Q99592 522 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 SLC29A3Q9BZD2 475 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 CNOT11Q9UKZ1 510 aaKnown RBP13.3□□□□□ -0.28
NEK3-205ENST00000610828 SLC22A14Q9Y267 594 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 ITM2BQ9Y287 266 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 TMEM202A6NGA9 273 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 TPST1O60507 370 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 TULP3O75386 442 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 ADH1CP00326 375 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 PDYNP01213 254 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 FTH1P02794 183 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 SRPRAP08240 638 aaKnown RBP13.3□□□□□ -0.28
NEK3-205ENST00000610828 IL10P22301 178 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 ITPKAP23677 461 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 OXTRP30559 389 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 MMP12P39900 470 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 EEFSECP57772 596 aaKnown RBP13.3□□□□□ -0.28
NEK3-205ENST00000610828 MESP2Q0VG99 397 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 SP140Q13342 867 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 CYP51A1Q16850 503 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 UGT2A3Q6UWM9 527 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 DLEU7Q6UYE1 221 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 RNF165Q6ZSG1 346 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 DPPA4Q7L190 304 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 PARS2Q7L3T8 475 aaKnown RBP13.3□□□□□ -0.28
NEK3-205ENST00000610828 RAVER1Q8IY67 606 aaKnown RBP13.3□□□□□ -0.28
NEK3-205ENST00000610828 SELENOMQ8WWX9 145 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 LRIG1Q96JA1 1093 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 WRAP53Q9BUR4 548 aaKnown RBP13.3□□□□□ -0.28
NEK3-205ENST00000610828 DPY30Q9C005 99 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 ATG10Q9H0Y0 220 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 RAD18Q9NS91 495 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 DPP7Q9UHL4 492 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 USP22Q9UPT9 525 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 PLXNA2O75051 1894 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 GRXCR2A6NFK2 248 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 ARNTLO00327 626 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 IFRD1O00458 451 aaPredicted RBP13.29□□□□□ -0.28
NEK3-205ENST00000610828 AP2A2O94973 939 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 ASLP04424 464 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 EN2P19622 333 aaPredicted RBP13.29□□□□□ -0.28
NEK3-205ENST00000610828 MTPNP58546 118 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 SMU1Q2TAY7 513 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 FAM174BQ3ZCQ3 159 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 SYTL3Q4VX76 610 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 IRAK1BP1Q5VVH5 260 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 ERAP2Q6P179 960 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 NEK5Q6P3R8 708 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 TTC23LQ6PF05 361 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 ISLR2Q6UXK2 745 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 LIPIQ6XZB0 460 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 ERMP1Q7Z2K6 904 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 RALGPS2Q86X27 583 aaPredicted RBP13.29□□□□□ -0.28
NEK3-205ENST00000610828 PTRH1Q86Y79 214 aaKnown RBP13.29□□□□□ -0.28
NEK3-205ENST00000610828 APLFQ8IW19 511 aaPredicted RBP13.29□□□□□ -0.28
NEK3-205ENST00000610828 ST13P4Q8IZP2 240 aaPredicted RBP13.29□□□□□ -0.28
NEK3-205ENST00000610828 CLHC1Q8NHS4 586 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 BTN2A2Q8WVV5 523 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 TIFAQ96CG3 184 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 AP2M1Q96CW1 435 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 ACPTQ9BZG2 426 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 MUC13Q9H3R2 512 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 ELOVL6Q9H5J4 265 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 C1orf109Q9NX04 203 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 UBAP1Q9NZ09 502 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 DKK3Q9UBP4 350 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 SLC16A5O15375 505 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 HNRNPRO43390 633 aaKnown RBP13.29□□□□□ -0.28
NEK3-205ENST00000610828 TSPAN6O43657 245 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 CKMT2P17540 419 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 SLC6A12P48065 614 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 NEK2P51955 445 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 METAP1P53582 386 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 CTSCP53634 463 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 AP1S2P56377 157 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 GRM2Q14416 872 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 SUSD1Q6UWL2 747 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 TECPR1Q7Z6L1 1165 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 ADGRD2Q7Z7M1 963 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 KRTCAP2Q8N6L1 136 aa13.29□□□□□ -0.28
NEK3-205ENST00000610828 PIP4K2CQ8TBX8 421 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms