RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 SLC22A4Q9H015 551 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 ABCG2Q9UNQ0 655 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 MEMO1Q9Y316 297 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 IRF9Q00978 393 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 HERC3Q15034 1050 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 RAP2AP10114 183 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 SEC13P55735 322 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 GNA12Q03113 381 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 BLMHQ13867 455 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 GPC2Q8N158 579 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 SDR16C5Q8N3Y7 309 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 PTTG2Q9NZH5 202 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 WTIPA6NIX2 430 aaPredicted RBP12.86□□□□□ -0.35
USP6NL-205ENST00000609104 ACSL1P33121 698 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 RASGEF1BQ0VAM2 473 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 PPTC7Q8NI37 304 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 RNF225M0QZC1 329 aaPredicted RBP12.86□□□□□ -0.35
USP6NL-205ENST00000609104 RENP00797 406 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 EPHX1P07099 455 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 MPP2Q14168 576 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 XKR4Q5GH76 650 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 PDE12Q6L8Q7 609 aaKnown RBP12.86□□□□□ -0.35
USP6NL-205ENST00000609104 SLC51AQ86UW1 340 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 OR2AJ1Q8NGZ0 328 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 C8orf48Q96LL4 319 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 RNF121Q9H920 327 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 IRF6O14896 467 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 MSCO60682 206 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 XKP51811 444 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 RABGGTBP53611 331 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 RIPOR3Q96MK2 946 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 YIPF4Q9BSR8 244 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 DPEP2Q9H4A9 486 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 M0R036 132 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 NOL4O94818 638 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 TACR2P21452 398 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 PLA2G16P53816 162 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 TOR1AIP1Q5JTV8 583 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 RBM48Q5RL73 367 aaKnown RBP12.86□□□□□ -0.35
USP6NL-205ENST00000609104 KLHDC10Q6PID8 442 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 TCAF2A6NFQ2 919 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 OR6C75A6NL08 312 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 NPHS1O60500 1241 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 CLCNKBP51801 687 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 WSCD2Q2TBF2 565 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 SCGB2B2Q4G0G5 96 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 TMEM203Q969S6 136 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 PREX1Q8TCU6 1659 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 H3BSH0 61 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 GLUD1P00367 558 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 TNFAIP8L2Q6P589 184 aaPredicted RBP12.85□□□□□ -0.35
USP6NL-205ENST00000609104 FOXRED2Q8IWF2 684 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 FSTL5Q8N475 847 aaPredicted RBP12.85□□□□□ -0.35
USP6NL-205ENST00000609104 FCGR1BQ92637 280 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 ESAMQ96AP7 390 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 BARD1Q99728 777 aaKnown RBP12.85□□□□□ -0.35
USP6NL-205ENST00000609104 B4GALT4O60513 344 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 IQCCQ4KMZ1 466 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 FCF1Q9Y324 198 aaKnown RBP12.85□□□□□ -0.35
USP6NL-205ENST00000609104 UGT1A9O60656 530 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 UGT1A6P19224 532 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 IDSP22304 550 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 UGT1A1P22309 533 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 UGT1A4P22310 534 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 CPN2P22792 545 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 UGT1A3P35503 534 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 KIAA1161Q6NSJ0 714 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 OR5K1Q8NHB7 308 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 C1orf216Q8TAB5 229 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 UGT1A7Q9HAW7 530 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 UGT1A10Q9HAW8 530 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 UGT1A8Q9HAW9 530 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 HMGXB4Q9UGU5 601 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 MATN3O15232 486 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 ALPPP05187 535 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 ARFRP1Q13795 201 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 FGFBP2Q9BYJ0 223 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 TREM1Q9NP99 234 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 FARSBQ9NSD9 589 aaKnown RBP12.85□□□□□ -0.35
USP6NL-205ENST00000609104 SLC35G6P0C7Q6 338 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 ZNF3P17036 446 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 MERTKQ12866 999 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 LRRC73Q5JTD7 316 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 SPIN1Q9Y657 262 aaPredicted RBP12.85□□□□□ -0.35
USP6NL-205ENST00000609104 WNT7AO00755 349 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 SMAD9O15198 467 aaKnown RBP12.85□□□□□ -0.35
USP6NL-205ENST00000609104 PRAMEF12O95522 483 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 ASLP04424 464 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 CYP11A1P05108 521 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 FKBP1AP62942 108 aaKnown RBP12.85□□□□□ -0.35
USP6NL-205ENST00000609104 SLITRK4Q8IW52 837 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 TUBGCP5Q96RT8 1024 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 MTERF1Q99551 399 aaKnown RBP12.85□□□□□ -0.35
USP6NL-205ENST00000609104 CALML5Q9NZT1 146 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 ROBO3Q96MS0 1386 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 MMP3P08254 477 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 SLC3A1Q07837 685 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 EFR3AQ14156 821 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 CCDC120Q96HB5 630 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 TSPAN18Q96SJ8 248 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms