RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 RELNP78509 3460 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 HEATR9A2RTY3 570 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 TTLL8A6PVC2 850 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 ZNF185O15231 689 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 LIASO43766 372 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 KLF7O75840 302 aaPredicted RBP7.36□□□□□ -1.23
CUX1-219ENST00000606749 CEACAM4O75871 244 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 OR2B3O76000 313 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 TMEM63AO94886 807 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 GAS8O95995 478 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 GOT2P00505 430 aaKnown RBP7.36□□□□□ -1.23
CUX1-219ENST00000606749 CHRM5P08912 532 aaPredicted RBP7.36□□□□□ -1.23
CUX1-219ENST00000606749 HBQ1P09105 142 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 OR56A5P0C7T3 313 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 ETS1P14921 441 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 AGXTP21549 392 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 CCR7P32248 378 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 SHMT2P34897 504 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 FDFT1P37268 417 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 GABRA4P48169 554 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 PGDP52209 483 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 PLOD1Q02809 727 aaPredicted RBP7.36□□□□□ -1.23
CUX1-219ENST00000606749 ACVR1Q04771 509 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 CDH17Q12864 832 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 SSPNQ14714 243 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 NADK2Q4G0N4 442 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 TSTD2Q5T7W7 516 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 ZNF385CQ66K41 422 aaPredicted RBP7.36□□□□□ -1.23
CUX1-219ENST00000606749 MED25Q71SY5 747 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 PRUNE1Q86TP1 453 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 TRIM73Q86UV7 250 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 HOOK3Q86VS8 718 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 GPR135Q8IZ08 494 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 DNAJC22Q8N4W6 341 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 RNF10Q8N5U6 811 aaKnown RBP7.36□□□□□ -1.23
CUX1-219ENST00000606749 ZBTB2Q8N680 514 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 C19orf47Q8N9M1 422 aaKnown RBP7.36□□□□□ -1.23
CUX1-219ENST00000606749 TMEM102Q8N9M5 508 aaPredicted RBP7.36□□□□□ -1.23
CUX1-219ENST00000606749 FDCSPQ8NFU4 85 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 OR4L1Q8NH43 312 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 UBE2Q2Q8WVN8 375 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 C1orf54Q8WWF1 131 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 N4BP2L2Q92802 583 aaPredicted RBP7.36□□□□□ -1.23
CUX1-219ENST00000606749 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.36□□□□□ -1.233e-18■■■■■ 82.4
CUX1-219ENST00000606749 SGSM3Q96HU1 749 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 RANBP9Q96S59 729 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 TTC1Q99614 292 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 FRMD8P1Q9BZ68 369 aaPredicted RBP7.36□□□□□ -1.23
CUX1-219ENST00000606749 CHRNA10Q9GZZ6 450 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 CASS4Q9NQ75 786 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 OR6C2Q9NZP2 312 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 IMPACTQ9P2X3 320 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 RIMKLBQ9ULI2 386 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 ZNF148Q9UQR1 794 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 TDRKHQ9Y2W6 561 aaKnown RBP7.36□□□□□ -1.23
CUX1-219ENST00000606749 ZNF451Q9Y4E5 1061 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 PCDHGB7Q9Y5F8 929 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 CAPN6Q9Y6Q1 641 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 AP1M2Q9Y6Q5 423 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 SEC16AO15027 2179 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 MED13Q9UHV7 2174 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 PIKFYVEQ9Y2I7 2098 aa7.36□□□□□ -1.23
CUX1-219ENST00000606749 TNRC6AQ8NDV7 1962 aaKnown RBP7.35□□□□□ -1.23
CUX1-219ENST00000606749 A0A0J9YY10 115 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 A6NL46 340 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 IQCF5A8MTL0 148 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 ISM1B1AKI9 464 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 E7EVH7 732 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 F8W8V4 182 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 SLCO2B1O94956 709 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 IFNB1P01574 187 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 CTSBP07858 339 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 CBSLP0DN79 551 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 CBSP35520 551 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 PPARGP37231 505 aaPredicted RBP7.35□□□□□ -1.23
CUX1-219ENST00000606749 CSE1LP55060 971 aaKnown RBP7.35□□□□□ -1.23
CUX1-219ENST00000606749 SNX1Q13596 522 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 SEMA3AQ14563 771 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 KIR2DS3Q14952 304 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 NCF4Q15080 339 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 KYNUQ16719 465 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 DEFB110Q30KQ9 67 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 DNAJC21Q5F1R6 531 aaKnown RBP7.35□□□□□ -1.23
CUX1-219ENST00000606749 C1orf189Q5VU69 101 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 MLIPQ5VWP3 458 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 RHBDD2Q6NTF9 364 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 AFTPHQ6ULP2 937 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 PPP1R21Q6ZMI0 780 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 ZNF534Q76KX8 674 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 NLRP9Q7RTR0 991 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 ATCAYQ86WG3 371 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 SLC13A5Q86YT5 568 aaPredicted RBP7.35□□□□□ -1.23
CUX1-219ENST00000606749 VRK3Q8IV63 474 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 FAM20CQ8IXL6 584 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 SLC22A15Q8IZD6 547 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 FAM26EQ8N5C1 309 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 GLIS1Q8NBF1 620 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 SPC24Q8NBT2 197 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 OR6P1Q8NGX9 317 aa7.35□□□□□ -1.23
CUX1-219ENST00000606749 CPT1CQ8TCG5 803 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms