RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 CPNE1Q99829 537 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 MCMBPQ9BTE3 642 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 UGT1A7Q9HAW7 530 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 UGT1A10Q9HAW8 530 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 UGT1A8Q9HAW9 530 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 MLXIPLQ9NP71 852 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 FGFR1OP2Q9NVK5 253 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 RBM22Q9NW64 420 aaKnown RBP eCLIP12.58□□□□□ -0.4
SCAF1-202ENST00000595242 LUZP4Q9P127 313 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 RRP15Q9Y3B9 282 aaKnown RBP12.58□□□□□ -0.4
SCAF1-202ENST00000595242 TACC2O95359 2948 aa12.58□□□□□ -0.4
SCAF1-202ENST00000595242 CCDC168Q8NDH2 2452 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 PIPSLA2A3N6 862 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 INSIG1O15503 277 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 PRAMEF11O60813 436 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 RAMP2O60895 175 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 CREG1O75629 220 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 RECQL5O94762 991 aaPredicted RBP12.57□□□□□ -0.4
SCAF1-202ENST00000595242 TMCC1O94876 653 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 PIGNO95427 931 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 IGSF6O95976 241 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 FUCA1P04066 466 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 PYGBP11216 843 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 ZNF28P17035 718 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 ADRA1DP25100 572 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 MMP12P39900 470 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 LEPRP48357 1165 aaKnown RBP12.57□□□□□ -0.4
SCAF1-202ENST00000595242 CSE1LP55060 971 aaKnown RBP12.57□□□□□ -0.4
SCAF1-202ENST00000595242 GRTP1Q5TC63 336 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 CGB2Q6NT52 195 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 JMJD6Q6NYC1 403 aaPredicted RBP12.57□□□□□ -0.4
SCAF1-202ENST00000595242 C6orf15Q6UXA7 325 aaPredicted RBP12.57□□□□□ -0.4
SCAF1-202ENST00000595242 RANBP10Q6VN20 620 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 TAX1BP1Q86VP1 789 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 ZNF761Q86XN6 746 aaPredicted RBP12.57□□□□□ -0.4
SCAF1-202ENST00000595242 ANKS4BQ8N8V4 417 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 Q8NA96 180 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 OR10G6Q8NH81 332 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 HCAR2Q8TDS4 363 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 RNF31Q96EP0 1072 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 CABS1Q96KC9 395 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 MRGPRX2Q96LB1 330 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 RANBP9Q96S59 729 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 PLCD4Q9BRC7 762 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 SLC25A23Q9BV35 468 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 ULBP3Q9BZM4 244 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 UNKQ9C0B0 810 aaKnown RBP12.57□□□□□ -0.4
SCAF1-202ENST00000595242 MAGEH1Q9H213 219 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 WDR26Q9H7D7 661 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 SP110Q9HB58 689 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 PDFQ9HBH1 243 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 TRNAU1APQ9NX07 287 aaKnown RBP12.57□□□□□ -0.4
SCAF1-202ENST00000595242 NSMCE4AQ9NXX6 385 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 KCND3Q9UK17 655 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 ST14Q9Y5Y6 855 aa12.57□□□□□ -0.4
SCAF1-202ENST00000595242 A6NCN8 305 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 COPEO14579 308 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 KLF11O14901 512 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 KDELR3O43731 214 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 EDF1O60869 148 aaKnown RBP12.56□□□□□ -0.4
SCAF1-202ENST00000595242 VARSP26640 1264 aaKnown RBP12.56□□□□□ -0.4
SCAF1-202ENST00000595242 CRHR1P34998 444 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 GNPDA1P46926 289 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 CORO7P57737 925 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 RHOAP61586 193 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 PEX6Q13608 980 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 NR6A1Q15406 480 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 TMCO4Q5TGY1 634 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 MARC1Q5VT66 337 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 PDPK2PQ6A1A2 396 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 PNCKQ6P2M8 343 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 WDR74Q6RFH5 385 aaPredicted RBP12.56□□□□□ -0.4
SCAF1-202ENST00000595242 LYSMD3Q7Z3D4 306 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 SPATA21Q7Z572 469 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 CNTN4Q8IWV2 1026 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 GALNT6Q8NCL4 622 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 SPATA22Q8NHS9 363 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 RAB3IL1Q8TBN0 382 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 LRRC8CQ8TDW0 803 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 NSMCE1Q8WV22 266 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 SRPK1Q96SB4 655 aaKnown RBP12.56□□□□□ -0.4
SCAF1-202ENST00000595242 SLC38A3Q99624 504 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 RBBP8Q99708 897 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 ELAC2Q9BQ52 826 aaKnown RBP12.56□□□□□ -0.4
SCAF1-202ENST00000595242 FICDQ9BVA6 458 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 SUV39H2Q9H5I1 410 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 SLAMF7Q9NQ25 335 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 PIH1D1Q9NWS0 290 aaKnown RBP12.56□□□□□ -0.4
SCAF1-202ENST00000595242 ZFATQ9P243 1243 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 SLC17A7Q9P2U7 560 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 PLLPQ9Y342 182 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 PCDHGA9Q9Y5G4 932 aaKnown RBP12.56□□□□□ -0.4
SCAF1-202ENST00000595242 FER1L5A0AVI2 2057 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 DCHS2Q6V1P9 2916 aa12.56□□□□□ -0.4
SCAF1-202ENST00000595242 TSPAN11A1L157 253 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 GOLGA8RI6L899 631 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 J3KR12 359 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 KIAA0754O94854 1291 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 CBX6O95503 412 aa12.55□□□□□ -0.4
SCAF1-202ENST00000595242 RECKO95980 971 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms