RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 KCNAB1Q14722 419 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 KIR2DS3Q14952 304 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 PLEKHS1Q5SXH7 462 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 ANKRD22Q5VYY1 191 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 SPESP1Q6UW49 350 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 PCSK4Q6UW60 755 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 SYDE1Q6ZW31 735 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 LDB1Q86U70 411 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 ADGRF3Q8IZF5 1079 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 RAB42Q8N4Z0 105 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 GALNT6Q8NCL4 622 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 LPGAT1Q92604 370 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 SLC22A18Q96BI1 424 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 ZNF669Q96BR6 464 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 ELMO2Q96JJ3 720 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 FOPNLQ96NB1 174 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 CHRNA10Q9GZZ6 450 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 KCND1Q9NSA2 647 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 PCYOX1Q9UHG3 505 aa17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 TDRKHQ9Y2W6 561 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-204ENST00000594862 LOC101059948A0A1B0GTJ6 334 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 SLC9B1P1A6NJY1 282 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 AVILO75366 819 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 SCRG1O75711 98 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 C1QL1O75973 258 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 CHRM5P08912 532 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 ZNF28P17035 718 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 WT1P19544 449 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 DLSTP36957 453 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 MAGEA3P43357 314 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 TERF1P54274 439 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 THOC5Q13769 683 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 DHX34Q14147 1143 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 PAPD7Q5XG87 772 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 NEPROQ6NW34 567 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 BORAQ6PGQ7 559 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 UNC5AQ6ZN44 842 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 TMEM135Q86UB9 458 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 TMEM126BQ8IUX1 230 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 NAT8LQ8N9F0 302 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 CALML6Q8TD86 181 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 MAGEC3Q8TD91 643 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 STARD8Q92502 1023 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 ZNF501Q96CX3 271 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 LRFN5Q96NI6 719 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 NAPGQ99747 312 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 ASIC3Q9UHC3 531 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 CDYLQ9Y232 598 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 PCDHB3Q9Y5E6 796 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 PCDHGA6Q9Y5G7 932 aa17.18■□□□□ 0.34
SHKBP1-204ENST00000594862 SMAPO00193 183 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 USP1O94782 785 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 FKBP9O95302 570 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 ZIC2O95409 532 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 RECKO95980 971 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 CCNFP41002 786 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 CSE1LP55060 971 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 CDC20Q12834 499 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 PTK6Q13882 451 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 GPR19Q15760 415 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 KYNUQ16719 465 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 SLC5A12Q1EHB4 618 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 ANKRD20A4Q4UJ75 823 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 PWWP2BQ6NUJ5 590 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 CILP2Q8IUL8 1156 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 KRT222Q8N1A0 295 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 LKAAEAR1Q8TD35 194 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 RAD51AP1Q96B01 352 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 TCTN2Q96GX1 697 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 TRAPPC9Q96Q05 1148 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 NAT9Q9BTE0 207 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 GPR87Q9BY21 358 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 ADNPQ9H2P0 1102 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 XKR8Q9H6D3 395 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 LHX9Q9NQ69 397 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 RNF14Q9UBS8 474 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 SERTAD3Q9UJW9 196 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 CROTQ9UKG9 612 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 SAR1BQ9Y6B6 198 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 MAD1L1Q9Y6D9 718 aa17.17■□□□□ 0.34
SHKBP1-204ENST00000594862 ZNF462Q96JM2 2506 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 A0A0J9YY10 115 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 CTAGE9A4FU28 777 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 IQCF5A8MTL0 148 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 GOLGA8MH3BSY2 632 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 CCDC188H7C350 402 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 NDC80O14777 642 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 ZNF185O15231 689 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 KLK3P07288 261 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 HBQ1P09105 142 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 ST6GAL1P15907 406 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 UGT2B7P16662 529 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 TCN2P20062 427 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 PKLRP30613 574 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 TBR1Q16650 682 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 TTLL9Q3SXZ7 439 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 RNASEH2BQ5TBB1 312 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 ZNF470Q6ECI4 717 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 CES3Q6UWW8 571 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 NAPRTQ6XQN6 538 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms