RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PLEKHS1Q5SXH7 462 aa22.72■■□□□ 1.23
LSM4-204ENST00000594828 ASZ1Q8WWH4 475 aa22.72■■□□□ 1.23
LSM4-204ENST00000594828 AP1M1Q9BXS5 423 aa22.72■■□□□ 1.23
LSM4-204ENST00000594828 CHST8Q9H2A9 424 aa22.72■■□□□ 1.23
LSM4-204ENST00000594828 OR6C2Q9NZP2 312 aa22.72■■□□□ 1.23
LSM4-204ENST00000594828 CHRM5P08912 532 aaPredicted RBP22.71■■□□□ 1.23
LSM4-204ENST00000594828 UGT2B7P16662 529 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 CYP2A7P20853 494 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 TTPAP49638 278 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 RPS18P62269 152 aaKnown RBP22.71■■□□□ 1.23
LSM4-204ENST00000594828 IZUMO3Q5VZ72 239 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 CDHR3Q6ZTQ4 885 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 SYVN1Q86TM6 617 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 SLC22A15Q8IZD6 547 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 DSELQ8IZU8 1212 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 OR2A14Q96R47 310 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 SLC7A5P2Q9GIP4 190 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 ACTR5Q9H9F9 607 aaPredicted RBP22.71■■□□□ 1.23
LSM4-204ENST00000594828 TREX1Q9NSU2 369 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 MARCH4Q9P2E8 410 aaPredicted RBP22.71■■□□□ 1.23
LSM4-204ENST00000594828 MAN2B2Q9Y2E5 1009 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 PPP2R2CQ9Y2T4 447 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 BOD1L1Q8NFC6 3051 aa22.71■■□□□ 1.23
LSM4-204ENST00000594828 IQCF5A8MTL0 148 aa22.7■■□□□ 1.22
LSM4-204ENST00000594828 PRMT5O14744 637 aaPredicted RBP22.7■■□□□ 1.22
LSM4-204ENST00000594828 APOA4P06727 396 aa22.7■■□□□ 1.22
LSM4-204ENST00000594828 NMBRP28336 390 aa22.7■■□□□ 1.22
LSM4-204ENST00000594828 UGT8Q16880 541 aa22.7■■□□□ 1.22
LSM4-204ENST00000594828 DNAJC21Q5F1R6 531 aaKnown RBP22.7■■□□□ 1.22
LSM4-204ENST00000594828 ZNF789Q5FWF6 425 aa22.7■■□□□ 1.22
LSM4-204ENST00000594828 TRIM73Q86UV7 250 aa22.7■■□□□ 1.22
LSM4-204ENST00000594828 TCTN2Q96GX1 697 aa22.7■■□□□ 1.22
LSM4-204ENST00000594828 CLMPQ9H6B4 373 aa22.7■■□□□ 1.22
LSM4-204ENST00000594828 SPHK1Q9NYA1 384 aa22.7■■□□□ 1.22
LSM4-204ENST00000594828 PLAGL1Q9UM63 463 aa22.7■■□□□ 1.22
LSM4-204ENST00000594828 CDYLQ9Y232 598 aa22.7■■□□□ 1.22
LSM4-204ENST00000594828 E7EQ34 232 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 MKRN2OSH3BPM6 223 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 GPC4O75487 556 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 RORAP35398 523 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 CSRP3P50461 194 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 ITGA1P56199 1179 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 CDK16Q00536 496 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 LACTB2Q53H82 288 aaPredicted RBP22.69■■□□□ 1.22
LSM4-204ENST00000594828 PTRHD1Q6GMV3 140 aaKnown RBP22.69■■□□□ 1.22
LSM4-204ENST00000594828 LCN10Q6JVE6 187 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 LRRC8BQ6P9F7 803 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 VRK3Q8IV63 474 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 KRT222Q8N1A0 295 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 PRELID2Q8N945 189 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 C19orf47Q8N9M1 422 aaKnown RBP22.69■■□□□ 1.22
LSM4-204ENST00000594828 LKAAEAR1Q8TD35 194 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 THAP4Q8WY91 577 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 N4BP2L2Q92802 583 aaPredicted RBP22.69■■□□□ 1.22
LSM4-204ENST00000594828 FAM60AQ9NP50 221 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 PCMTD2Q9NV79 361 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 ANAPC2Q9UJX6 822 aa22.69■■□□□ 1.22
LSM4-204ENST00000594828 BSNQ9UPA5 3926 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 ISM1B1AKI9 464 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 NDUFS3O75489 264 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 RFPL1O75677 317 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 RAB40ALP0C0E4 278 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 TPSB2P20231 275 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 MGAT1P26572 445 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 AOAHP28039 575 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 PMS2P54278 862 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 TPSAB1Q15661 275 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 KCTD19Q17RG1 926 aaPredicted RBP22.68■■□□□ 1.22
LSM4-204ENST00000594828 GPR135Q8IZ08 494 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 MPP5Q8N3R9 675 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 CFAP61Q8NHU2 1237 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 FLVCR1-AS1Q8TAF5 88 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 KIFC1Q9BW19 673 aa22.68■■□□□ 1.22
LSM4-204ENST00000594828 TTC7AQ9ULT0 858 aaPredicted RBP22.68■■□□□ 1.22
LSM4-204ENST00000594828 A0A0J9YY10 115 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 ZNF749O43361 778 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 SLCO2B1O94956 709 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 RPN2P04844 631 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 HBQ1P09105 142 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 TLE1Q04724 770 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 KIR2DS3Q14952 304 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 TMED2Q15363 201 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 TRIP13Q15645 432 aaPredicted RBP22.67■■□□□ 1.22
LSM4-204ENST00000594828 ZIC1Q15915 447 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 APLFQ8IW19 511 aaPredicted RBP22.67■■□□□ 1.22
LSM4-204ENST00000594828 SYTL1Q8IYJ3 562 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 ENDOVQ8N8Q3 282 aaKnown RBP22.67■■□□□ 1.22
LSM4-204ENST00000594828 PANX3Q96QZ0 392 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 NLNQ9BYT8 704 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 CHRNA10Q9GZZ6 450 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 P2RY12Q9H244 342 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 MRM3Q9HC36 420 aaKnown RBP22.67■■□□□ 1.22
LSM4-204ENST00000594828 SYBUQ9NX95 663 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 GNPTGQ9UJJ9 305 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 TLK1Q9UKI8 766 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 TP53TG5Q9Y2B4 290 aa22.67■■□□□ 1.22
LSM4-204ENST00000594828 TCRBV7S3A2A0A539 114 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 RAB28P51157 221 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 TERF1P54274 439 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 SARNPP82979 210 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms