RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 PNLIPRP3Q17RR3 467 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 C2orf76Q3KRA6 126 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 C1orf141Q5JVX7 400 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 GKAP1Q5VSY0 366 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-216ENST00000593223 TMEM154Q6P9G4 183 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 KLHL35Q6PF15 583 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 SARM1Q6SZW1 724 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 FIP1L1Q6UN15 594 aaKnown RBP4.77□□□□□ -1.65
SMAD4-216ENST00000593223 GLDNQ6ZMI3 551 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-216ENST00000593223 SEPT14Q6ZU15 432 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 SLFN11Q7Z7L1 901 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 TMEM110Q86TL2 294 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 SRBD1Q8N5C6 995 aaKnown RBP4.77□□□□□ -1.65
SMAD4-216ENST00000593223 ANKRD20A12PQ8NF67 263 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 CTCFLQ8NI51 663 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-216ENST00000593223 KIAA1524Q8TCG1 905 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 SLC20A1Q8WUM9 679 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 ANKRD49Q8WVL7 239 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 CMTM3Q96MX0 182 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 QRFPRQ96P65 431 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 ITPAQ9BY32 194 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 PDZD7Q9H5P4 517 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 YY1AP1Q9H869 796 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 VPS37BQ9H9H4 285 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 LRRC4Q9HBW1 653 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 LTB4R2Q9NPC1 389 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 HCFC1R1Q9NWW0 138 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 STK39Q9UEW8 545 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 FBXL2Q9UKC9 423 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 ACSL5Q9ULC5 683 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 ICAM5Q9UMF0 924 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 CEP162Q5TB80 1403 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 KNDC1Q76NI1 1749 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 ANKRD30BQ9BXX2 1392 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 QRICH2Q9H0J4 1663 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 BRCA2P51587 3418 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 hCG_1807616A0A1W2PRN6 198 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 PRAC2D3DTV9 90 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 ZNF587BE7ETH6 402 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 TULP2O00295 520 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 ATP2A1O14983 1001 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 HCRTR2O43614 444 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 LDB3O75112 727 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 SOCS5O75159 536 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 PCP11498 1178 aaKnown RBP4.76□□□□□ -1.65
SMAD4-216ENST00000593223 GAP43P17677 238 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 MAP2K2P36507 400 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 NNMTP40261 264 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 USP8P40818 1118 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 FASLGP48023 281 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 RANBP2P49792 3224 aaKnown RBP4.76□□□□□ -1.65
SMAD4-216ENST00000593223 TKTL1P51854 596 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 RELQ04864 619 aaPredicted RBP4.76□□□□□ -1.65
SMAD4-216ENST00000593223 CHAF1BQ13112 559 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 CRYMQ14894 314 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 WBP2NLQ6ICG8 309 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 TRNP1Q6NT89 227 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 IYDQ6PHW0 289 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 SATL1Q86VE3 508 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 THNSL1Q8IYQ7 743 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 RBMXL3Q8N7X1 1067 aaKnown RBP4.76□□□□□ -1.65
SMAD4-216ENST00000593223 MAB21L3Q8N8X9 362 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 DENND6BQ8NEG7 585 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 OR8K5Q8NH50 307 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 SCFD2Q8WU76 684 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 ZFAND2BQ8WV99 257 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 DNAAF4Q8WXU2 420 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 SORCS1Q8WY21 1168 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 CD101Q93033 1021 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 ABTB1Q969K4 478 aaPredicted RBP4.76□□□□□ -1.65
SMAD4-216ENST00000593223 RHBDF1Q96CC6 855 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 VPS39Q96JC1 886 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 CITED2Q99967 270 aaPredicted RBP4.76□□□□□ -1.65
SMAD4-216ENST00000593223 ACAT2Q9BWD1 397 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 SPRY4Q9C004 299 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 EVA1AQ9H8M9 152 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 CHCHD3Q9NX63 227 aaKnown RBP4.76□□□□□ -1.65
SMAD4-216ENST00000593223 COPG2Q9UBF2 871 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 UBA2Q9UBT2 640 aaPredicted RBP4.76□□□□□ -1.65
SMAD4-216ENST00000593223 MORF4L1Q9UBU8 362 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 HPCAL4Q9UM19 191 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 C2CD2Q9Y426 696 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 LYVE1Q9Y5Y7 322 aa4.76□□□□□ -1.65
SMAD4-216ENST00000593223 CLTCL1P53675 1640 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 TRPM1Q7Z4N2 1603 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 IFITM10A6NMD0 228 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 EIF4E1BA6NMX2 242 aaKnown RBP4.75□□□□□ -1.65
SMAD4-216ENST00000593223 CCDC169A6NNP5 214 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 UBE2CO00762 179 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 AP3D1O14617 1153 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 NOL3O60936 208 aaKnown RBP4.75□□□□□ -1.65
SMAD4-216ENST00000593223 SEC22BO75396 215 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 GPC4O75487 556 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 STAM2O75886 525 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 ATP5BP06576 529 aaKnown RBP4.75□□□□□ -1.65
SMAD4-216ENST00000593223 MYOD1P15172 320 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 FERP16591 822 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 DGKAP23743 735 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 PAX7P23759 505 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 MCM3P25205 808 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms