RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 ASPDHA6ND91 283 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 PFDN1O60925 122 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 GNAO1P09471 354 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 C1SP09871 688 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 NELFEP18615 380 aaKnown RBP13.98□□□□□ -0.17
RANBP3-229ENST00000592771 AGTR2P50052 363 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 HLCSP50747 726 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 CDH15P55291 814 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 ADARB1P78563 741 aaKnown RBP13.98□□□□□ -0.17
RANBP3-229ENST00000592771 TGFBIQ15582 683 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 TBC1D25Q3MII6 688 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 CYBRD1Q53TN4 286 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 GPRC6AQ5T6X5 926 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 ZNF697Q5TEC3 545 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 ZDHHC20Q5W0Z9 365 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 NANOGP8Q6NSW7 305 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 GDPD4Q6W3E5 623 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 DNAJB14Q8TBM8 379 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 RNF217Q8TC41 542 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 BPIFB1Q8TDL5 484 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 CYGBQ8WWM9 190 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 ING5Q8WYH8 240 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 C12orf43Q96C57 262 aaKnown RBP13.98□□□□□ -0.17
RANBP3-229ENST00000592771 LRRC3BQ96PB8 259 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 NANOGQ9H9S0 305 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 CXorf21Q9HAI6 301 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 KLHL42Q9P2K6 505 aa13.98□□□□□ -0.17
RANBP3-229ENST00000592771 FAF1Q9UNN5 650 aaPredicted RBP13.98□□□□□ -0.17
RANBP3-229ENST00000592771 TNPO3Q9Y5L0 923 aaKnown RBP13.98□□□□□ -0.17
RANBP3-229ENST00000592771 LAMA2P24043 3122 aaKnown RBP13.97□□□□□ -0.17
RANBP3-229ENST00000592771 A0A1B0GTL3 188 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 FAM149AA5PLN7 773 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 EI24O14681 340 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 PER2O15055 1255 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 BNIP3LO60238 219 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 PRSS23O95084 383 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 CISD3P0C7P0 127 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 HOXB6P17509 224 aaKnown RBP13.97□□□□□ -0.17
RANBP3-229ENST00000592771 POLR2EP19388 210 aaKnown RBP13.97□□□□□ -0.17
RANBP3-229ENST00000592771 HMOX2P30519 316 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 MYBPC3Q14896 1274 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 PCBP2Q15366 365 aaKnown RBP eCLIP13.97□□□□□ -0.172e-6■■□□□ 12.2
RANBP3-229ENST00000592771 SMU1Q2TAY7 513 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 ATP6AP1LQ52LC2 224 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 PAGE3Q5JUK9 113 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 BRAT1Q6PJG6 821 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 KIAA2013Q8IYS2 634 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 CELF5Q8N6W0 485 aaKnown RBP13.97□□□□□ -0.17
RANBP3-229ENST00000592771 ITFG1Q8TB96 612 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 FAM110BQ8TC76 370 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 FNDC8Q8TC99 324 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 NSMCE2Q96MF7 247 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 ZDHHC3Q9NYG2 299 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 B4GALT6Q9UBX8 382 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 ZNF225Q9UK10 706 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 AP3M1Q9Y2T2 418 aa13.97□□□□□ -0.17
RANBP3-229ENST00000592771 MRPS23Q9Y3D9 190 aaKnown RBP13.97□□□□□ -0.17
RANBP3-229ENST00000592771 SH3PXD2BA1X283 911 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 A8MX80 341 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 E2F3O00716 465 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 HOXC11O43248 304 aaPredicted RBP13.96□□□□□ -0.17
RANBP3-229ENST00000592771 TPST1O60507 370 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 DEAF1O75398 565 aaPredicted RBP13.96□□□□□ -0.17
RANBP3-229ENST00000592771 SLC25A14O95258 325 aaPredicted RBP13.96□□□□□ -0.17
RANBP3-229ENST00000592771 HPRP00739 348 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 CYP17A1P05093 508 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 JUNBP17275 347 aaPredicted RBP13.96□□□□□ -0.17
RANBP3-229ENST00000592771 SPINT3P49223 89 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 RGS4P49798 205 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 UFM1P61960 85 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 POLR2LP62875 67 aaKnown RBP13.96□□□□□ -0.17
RANBP3-229ENST00000592771 EPS8Q12929 822 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 TUBA3CQ13748 450 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 CBX2Q14781 532 aaPredicted RBP13.96□□□□□ -0.17
RANBP3-229ENST00000592771 DHCR24Q15392 516 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 RBBP7Q16576 425 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 EML3Q32P44 896 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 RABL3Q5HYI8 236 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 C6orf136Q5SQH8 315 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 RNF165Q6ZSG1 346 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 RIMKLAQ8IXN7 391 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 CLDN19Q8N6F1 224 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 PDPRQ8NCN5 879 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 BIRC7Q96CA5 298 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 ASIC4Q96FT7 647 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 SAMD11Q96NU1 681 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 HEPHQ9BQS7 1158 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 CD274Q9NZQ7 290 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 ASB1Q9Y576 335 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 TIMM22Q9Y584 194 aa13.96□□□□□ -0.17
RANBP3-229ENST00000592771 PLXNA2O75051 1894 aa13.96□□□□□ -0.18
RANBP3-229ENST00000592771 NCF1BA6NI72 391 aaPredicted RBP13.96□□□□□ -0.18
RANBP3-229ENST00000592771 NCF1CA8MVU1 366 aaPredicted RBP13.96□□□□□ -0.18
RANBP3-229ENST00000592771 CPNE6O95741 557 aa13.96□□□□□ -0.18
RANBP3-229ENST00000592771 ALBP02768 609 aa13.96□□□□□ -0.18
RANBP3-229ENST00000592771 MTHFD1P11586 935 aaKnown RBP13.96□□□□□ -0.18
RANBP3-229ENST00000592771 NCF1P14598 390 aaPredicted RBP13.96□□□□□ -0.18
RANBP3-229ENST00000592771 DGKAP23743 735 aa13.96□□□□□ -0.18
RANBP3-229ENST00000592771 NSG1P42857 185 aa13.96□□□□□ -0.18
RANBP3-229ENST00000592771 RECQLP46063 649 aaPredicted RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms