RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 CYGBQ8WWM9 190 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 GTF2H4Q92759 462 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 VPS50Q96JG6 964 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 HIST1H2AHQ96KK5 128 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 CCDC115Q96NT0 180 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 HIST1H2AJQ99878 128 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 H2AFJQ9BTM1 129 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 SLC12A9Q9BXP2 914 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 CLMPQ9H6B4 373 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 PARVBQ9HBI1 364 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 CD320Q9NPF0 282 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 TLR9Q9NR96 1032 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 PKD2L2Q9NZM6 624 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 VAPAQ9P0L0 249 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 CCL26Q9Y258 94 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 NEUROG3Q9Y4Z2 214 aa16.21■□□□□ 0.18
PRKCSH-217ENST00000592741 NEDD8-MDP1E9PL57 170 aa16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 MPC1LP0DKB6 136 aa16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 PABPC1P11940 636 aaKnown RBP16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 RPS9P46781 194 aaKnown RBP16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 POLR2LP62875 67 aaKnown RBP16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 HSPA14Q0VDF9 509 aa16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 FAM98BQ52LJ0 330 aaKnown RBP16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 ASTLQ6HA08 431 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 TTC33Q6PID6 262 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 TMEM25Q86YD3 366 aa16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 RIMKLAQ8IXN7 391 aa16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 OR2T12Q8NG77 320 aa16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 SH3GL1Q99961 368 aa16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 SMPD3Q9NY59 655 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 ZNHIT2Q9UHR6 403 aa16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 AP3M1Q9Y2T2 418 aa16.2■□□□□ 0.18
PRKCSH-217ENST00000592741 GSTA4O15217 222 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 NUAK1O60285 661 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 MT-ND1P03886 318 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 PGRP06401 933 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 NFKBIAP25963 317 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 CYP4F3Q08477 520 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 SP140Q13342 867 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 GBX1Q14549 363 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 CPSF6Q16630 551 aaKnown RBP eCLIP16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 PLA2G4EQ3MJ16 856 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 GGTA1PQ4G0N0 100 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 USP39Q53GS9 565 aaKnown RBP16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 LRRC73Q5JTD7 316 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 SPANXN4Q5MJ08 99 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 SUSD1Q6UWL2 747 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 GDPD4Q6W3E5 623 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 Q6ZVU0 165 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 DET1Q7L5Y6 550 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 CHST14Q8NCH0 376 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 SLC22A17Q8WUG5 538 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 MTFMTQ96DP5 389 aaKnown RBP16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 MPP4Q96JB8 637 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 ZNF583Q96ND8 569 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 CRISPLD2Q9H0B8 497 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 ZNF639Q9UID6 485 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 SLCO3A1Q9UIG8 710 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 SNX6Q9UNH7 406 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 CLOCKO15516 846 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 GNAO1P09471 354 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 RAP2AP10114 183 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 CYP2A6P11509 494 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 ATP1B2P14415 290 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 EPORP19235 508 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 CALRP27797 417 aaKnown RBP16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 CAPGP40121 348 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 CCR2P41597 374 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 RECQLP46063 649 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 ALDH3B2P48448 385 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 HNMTP50135 292 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 CHRNB3Q05901 458 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 PLEKHS1Q5SXH7 462 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 ZNF786Q8N393 782 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 DHRSXQ8N5I4 330 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 KRTCAP2Q8N6L1 136 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 ZNF557Q8N988 423 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 SELENOMQ8WWX9 145 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 THUMPD3Q9BV44 507 aaKnown RBP16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 BBS2Q9BXC9 721 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 ACPTQ9BZG2 426 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 TUBA8Q9NY65 449 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 CD84Q9UIB8 345 aa16.19■□□□□ 0.18
PRKCSH-217ENST00000592741 SLC16A5O15375 505 aa16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 DEAF1O75398 565 aaPredicted RBP16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 BMP10O95393 424 aa16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 PDYNP01213 254 aa16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 BCKDHAP12694 445 aa16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 ZNF30P17039 623 aa16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 CYP2A7P20853 494 aa16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 DDX6P26196 483 aaKnown RBP eCLIP16.18■□□□□ 0.186e-7■□□□□ 8.8
PRKCSH-217ENST00000592741 BOP1Q14137 746 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 FAM9CQ8IZT9 166 aa16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 DNAJB8Q8NHS0 232 aa16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 MAGEE2Q8TD90 523 aaPredicted RBP16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 ASB11Q8WXH4 323 aa16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 FIG4Q92562 907 aa16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 OR52E6Q96RD3 313 aa16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 UGT2B28Q9BY64 529 aa16.18■□□□□ 0.18
PRKCSH-217ENST00000592741 ELOVL6Q9H5J4 265 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms