RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 CYB5D1Q6P9G0 228 aa19.36■□□□□ 0.69
TRIM47-204ENST00000587339 AMZ2Q86W34 360 aa19.36■□□□□ 0.69
TRIM47-204ENST00000587339 ATL1Q8WXF7 558 aa19.36■□□□□ 0.69
TRIM47-204ENST00000587339 FBXL8Q96CD0 374 aa19.36■□□□□ 0.69
TRIM47-204ENST00000587339 CCDC138Q96M89 665 aa19.36■□□□□ 0.69
TRIM47-204ENST00000587339 DPEP2Q9H4A9 486 aa19.36■□□□□ 0.69
TRIM47-204ENST00000587339 MYO10Q9HD67 2058 aa19.36■□□□□ 0.69
TRIM47-204ENST00000587339 GPR89AB7ZAQ6 455 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 GPR89BP0CG08 455 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 FOSL2P15408 326 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 LBPP18428 481 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 BDKRB1P46663 353 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 CYLC2Q14093 348 aaPredicted RBP19.35■□□□□ 0.69
TRIM47-204ENST00000587339 XKR7Q5GH72 579 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 PTCRAQ6ISU1 281 aaPredicted RBP19.35■□□□□ 0.69
TRIM47-204ENST00000587339 IL27RAQ6UWB1 636 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 SCIMPQ6UWF3 145 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 Q7L0L9 218 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 SNX32Q86XE0 403 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 MYLK4Q86YV6 388 aaPredicted RBP19.35■□□□□ 0.69
TRIM47-204ENST00000587339 ATG10Q9H0Y0 220 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 RIC8BQ9NVN3 520 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 GIMAP2Q9UG22 337 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 MEI4A8MW99 385 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 LOC730098B7Z3J9 87 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 MAN2B1O00754 1011 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 ALDOCP09972 364 aaKnown RBP19.35■□□□□ 0.69
TRIM47-204ENST00000587339 MYCLP1P12525 358 aaPredicted RBP19.35■□□□□ 0.69
TRIM47-204ENST00000587339 CD1EP15812 388 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 MLLT1Q03111 559 aaPredicted RBP19.35■□□□□ 0.69
TRIM47-204ENST00000587339 GRB7Q14451 532 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 LEXMQ3ZCV2 418 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 XKR5Q6UX68 686 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 SNX31Q8N9S9 440 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 ACTR8Q9H981 624 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 SLC22A14Q9Y267 594 aa19.35■□□□□ 0.69
TRIM47-204ENST00000587339 PSMD12O00232 456 aaPredicted RBP19.34■□□□□ 0.69
TRIM47-204ENST00000587339 SLC31A1O15431 190 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 PEX11AO75192 247 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 CLDN9O95484 217 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 C1orf105O95561 183 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 EPORP19235 508 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 CPOXP36551 454 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 TPMTP51580 245 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 STX1BP61266 288 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 PPP2CBP62714 309 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 PPP2CAP67775 309 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 HERC3Q15034 1050 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 MLF2Q15773 248 aaPredicted RBP19.34■□□□□ 0.69
TRIM47-204ENST00000587339 CCSMST1Q4G0I0 132 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 ARHGAP24Q8N264 748 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 FBXO15Q8NCQ5 510 aaPredicted RBP19.34■□□□□ 0.69
TRIM47-204ENST00000587339 CD93Q9NPY3 652 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 DNAJC11Q9NVH1 559 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 TRPS1Q9UHF7 1281 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 ZNHIT2Q9UHR6 403 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 RNF11Q9Y3C5 154 aa19.34■□□□□ 0.69
TRIM47-204ENST00000587339 DNMT3AQ9Y6K1 912 aaPredicted RBP19.34■□□□□ 0.69
TRIM47-204ENST00000587339 KMOO15229 486 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 SLC16A8O95907 504 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 GABRG2P18507 467 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 ITPKAP23677 461 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 IGFALSP35858 605 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 PGM1P36871 562 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 HTR6P50406 440 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 ATP4BP51164 291 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 RPA4Q13156 261 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 CUL3Q13618 768 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 FASTKQ14296 549 aaKnown RBP19.33■□□□□ 0.69
TRIM47-204ENST00000587339 OGFOD2Q6N063 350 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 AGTRAPQ6RW13 159 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 ZNF852Q6ZMS4 543 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 FAM83HQ6ZRV2 1179 aaPredicted RBP19.33■□□□□ 0.69
TRIM47-204ENST00000587339 HOMEZQ8IX15 550 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 OR2T11Q8NH01 316 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 PKP4Q99569 1192 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 RTKNQ9BST9 563 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 FZD3Q9NPG1 666 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 STOX2Q9P2F5 926 aaPredicted RBP19.33■□□□□ 0.69
TRIM47-204ENST00000587339 SLC23A2Q9UGH3 650 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 CIDEBQ9UHD4 219 aa19.33■□□□□ 0.69
TRIM47-204ENST00000587339 FFAR3O14843 346 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 GPR42O15529 346 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 PRR35P0CG20 571 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 ACSL1P33121 698 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 PFN3P60673 137 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 SLC25A3Q00325 362 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 KIF19Q2TAC6 998 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 Q6ZS52 159 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 OXR1Q8N573 874 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 FLCNQ8NFG4 579 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 HMGB4Q8WW32 186 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 ASB12Q8WXK4 309 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 HBEGFQ99075 208 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 MYOCQ99972 504 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 BTBD1Q9H0C5 482 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 OR52A5Q9H2C5 316 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 MMADHCQ9H3L0 296 aaPredicted RBP19.33■□□□□ 0.68
TRIM47-204ENST00000587339 TM7SF3Q9NS93 570 aa19.33■□□□□ 0.68
TRIM47-204ENST00000587339 CCDC167Q9P0B6 97 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms