RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 PDE7BQ9NP56 450 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 SEMA5BQ9P283 1151 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 CHMP2BQ9UQN3 213 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 CDYLQ9Y232 598 aa14.38□□□□□ -0.11
ATG4D-207ENST00000587256 PIPSLA2A3N6 862 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 NDC80O14777 642 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 SLCO2B1O94956 709 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 CHRM3P20309 590 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 ARL4CP56559 192 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 MRPS25P82663 173 aaKnown RBP14.37□□□□□ -0.11
ATG4D-207ENST00000587256 ACY1Q03154 408 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 SRSF6Q13247 344 aaKnown RBP14.37□□□□□ -0.11
ATG4D-207ENST00000587256 IL11RAQ14626 422 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 MSS51Q4VC12 460 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 HSP90AA5PQ58FG0 334 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 ZNF789Q5FWF6 425 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 SPANXN3Q5MJ09 141 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 PLEKHS1Q5SXH7 462 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 HIBCHQ6NVY1 386 aaPredicted RBP14.37□□□□□ -0.11
ATG4D-207ENST00000587256 TTC23LQ6PF05 361 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 FBXO38Q6PIJ6 1188 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 PPP1R3BQ86XI6 285 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 CACNA2D3Q8IZS8 1091 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 NLGN4XQ8N0W4 816 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 ZBTB2Q8N680 514 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 SPATA4Q8NEY3 305 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 NLGN4YQ8NFZ3 816 aaPredicted RBP14.37□□□□□ -0.11
ATG4D-207ENST00000587256 CFAP36Q96G28 342 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 PPM1MQ96MI6 270 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 FOPNLQ96NB1 174 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 IARS2Q9NSE4 1012 aaKnown RBP14.37□□□□□ -0.11
ATG4D-207ENST00000587256 ACTR10Q9NZ32 417 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 OR6C2Q9NZP2 312 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 CIDEBQ9UHD4 219 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 LNPEPQ9UIQ6 1025 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 RARRES3Q9UL19 164 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 RUVBL2Q9Y230 463 aaKnown RBP14.37□□□□□ -0.11
ATG4D-207ENST00000587256 FAM169AQ9Y6X4 670 aa14.37□□□□□ -0.11
ATG4D-207ENST00000587256 SLC9B1P1A6NJY1 282 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 MAP3K7O43318 606 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 S1PR4O95977 384 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 CHRM5P08912 532 aaPredicted RBP14.36□□□□□ -0.11
ATG4D-207ENST00000587256 FGF5P12034 268 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 FOLR1P15328 257 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 PRDX3P30048 256 aaKnown RBP14.36□□□□□ -0.11
ATG4D-207ENST00000587256 PKLRP30613 574 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 BDKRB1P46663 353 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 RAB28P51157 221 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 MPP1Q00013 466 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.36□□□□□ -0.11
ATG4D-207ENST00000587256 HP1BP3Q5SSJ5 553 aaPredicted RBP14.36□□□□□ -0.11
ATG4D-207ENST00000587256 CNSTQ6PJW8 725 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 SPESP1Q6UW49 350 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 UNC5AQ6ZN44 842 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 ADGRF3Q8IZF5 1079 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 UNC5BQ8IZJ1 945 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 D2HGDHQ8N465 521 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 NKD1Q969G9 470 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 KIAA1143Q96AT1 154 aaPredicted RBP14.36□□□□□ -0.11
ATG4D-207ENST00000587256 PWWP2AQ96N64 755 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 KLHL25Q9H0H3 589 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 DPH5Q9H2P9 285 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 FANCEQ9HB96 536 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 C1GALT1Q9NS00 363 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 FGF21Q9NSA1 209 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 ZC3H7BQ9UGR2 993 aaKnown RBP14.36□□□□□ -0.11
ATG4D-207ENST00000587256 PILRAQ9UKJ1 303 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 FBXO5Q9UKT4 447 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 BTRCQ9Y297 605 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 SSUH2Q9Y2M2 353 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 SNX24Q9Y343 169 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 MRFAP1Q9Y605 127 aa14.36□□□□□ -0.11
ATG4D-207ENST00000587256 TEX51A0A1B0GUA7 166 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 FAM187AA6NFU0 413 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 K7ENP7 123 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 KIAA0754O94854 1291 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 DLGAP3O95886 979 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 ERVK-10P10266 1014 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 PVRP15151 417 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 UGT2B7P16662 529 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 ATP5DP30049 168 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 ELK3P41970 407 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 RPL21P46778 160 aaKnown RBP14.35□□□□□ -0.11
ATG4D-207ENST00000587256 TUBB4BP68371 445 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 CKAP4Q07065 602 aaKnown RBP14.35□□□□□ -0.11
ATG4D-207ENST00000587256 CALCOCO2Q13137 446 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 TUBB2AQ13885 445 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 GPR19Q15760 415 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 TTLL9Q3SXZ7 439 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 INO80CQ6PI98 192 aaPredicted RBP14.35□□□□□ -0.11
ATG4D-207ENST00000587256 MAATS1Q7Z4T9 603 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 TRIM73Q86UV7 250 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 RAB42Q8N4Z0 105 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 ESX1Q8N693 406 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 ZSCAN1Q8NBB4 408 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 BBOF1Q8ND07 529 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 LRRC39Q96DD0 335 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 CERS2Q96G23 380 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 TUBB2BQ9BVA1 445 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 RAB11FIP5Q9BXF6 653 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms