RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 GPC4O75487 556 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 CHRM5P08912 532 aaPredicted RBP17.13■□□□□ 0.33
TPM4-206ENST00000587201 TPBGLP0DKB5 382 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 RPS3P23396 243 aaKnown RBP eCLIP17.13■□□□□ 0.33
TPM4-206ENST00000587201 MAGEA6P43360 314 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 EIF3BP55884 814 aaKnown RBP17.13■□□□□ 0.33
TPM4-206ENST00000587201 POLE2P56282 527 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 ABRQ12979 859 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 CYP1B1Q16678 543 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 DEFB109BQ30KR1 87 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 CRTC2Q53ET0 693 aaPredicted RBP17.13■□□□□ 0.33
TPM4-206ENST00000587201 ATP1A1-AS1Q5TC04 95 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 MRNIPQ6NTE8 343 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 LRRC6Q86X45 466 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 ACTRT1Q8TDG2 376 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 CPT1BQ92523 772 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 P2RY12Q9H244 342 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 AKIRIN1Q9H9L7 192 aaPredicted RBP17.13■□□□□ 0.33
TPM4-206ENST00000587201 LATS2Q9NRM7 1088 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 GEMIN8Q9NWZ8 242 aaKnown RBP17.13■□□□□ 0.33
TPM4-206ENST00000587201 OR6C2Q9NZP2 312 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 SAMD15Q9P1V8 674 aa17.13■□□□□ 0.33
TPM4-206ENST00000587201 KALRNO60229 2985 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 GOLGA6L10A0A0M3HER8 536 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 ISM1B1AKI9 464 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 C21orf140B9A014 251 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 TMEM150CB9EJG8 249 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 PFDN6O15212 129 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 PHF2O75151 1096 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 TMEM63AO94886 807 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 RPN2P04844 631 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 PLA2G2AP14555 144 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 UGT2B7P16662 529 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 PAMP19021 973 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 ARNTP27540 789 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 AOAHP28039 575 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 ERV3-1Q14264 604 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 PRAMEF17Q5VTA0 474 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 KIAA0930Q6ICG6 404 aaPredicted RBP17.12■□□□□ 0.33
TPM4-206ENST00000587201 FAM199XQ6PEV8 388 aaPredicted RBP17.12■□□□□ 0.33
TPM4-206ENST00000587201 TRIM73Q86UV7 250 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 CAND1Q86VP6 1230 aaKnown RBP17.12■□□□□ 0.33
TPM4-206ENST00000587201 OR1L3Q8NH93 324 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 GSDMBQ8TAX9 411 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 GRK7Q8WTQ7 553 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 FAM117AQ9C073 453 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 ADNPQ9H2P0 1102 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 SPHK1Q9NYA1 384 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 SERTAD3Q9UJW9 196 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 PCDHGA6Q9Y5G7 932 aa17.12■□□□□ 0.33
TPM4-206ENST00000587201 PIEZO2Q9H5I5 2752 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 COL6A6A6NMZ7 2263 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 GOLGA8MH3BSY2 632 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 KPNA5O15131 536 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 CREG1O75629 220 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 KLK3P07288 261 aaPredicted RBP17.11■□□□□ 0.33
TPM4-206ENST00000587201 MLNP12872 115 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 CYP2A7P20853 494 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 FMO4P31512 558 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 KCNAB2Q13303 367 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 RNF187Q5TA31 235 aaPredicted RBP17.11■□□□□ 0.33
TPM4-206ENST00000587201 OTOAQ7RTW8 1153 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 C19orf47Q8N9M1 422 aaKnown RBP17.11■□□□□ 0.33
TPM4-206ENST00000587201 SKA2Q8WVK7 121 aaPredicted RBP17.11■□□□□ 0.33
TPM4-206ENST00000587201 ANP32BQ92688 251 aaKnown RBP17.11■□□□□ 0.33
TPM4-206ENST00000587201 N4BP2L2Q92802 583 aaPredicted RBP17.11■□□□□ 0.33
TPM4-206ENST00000587201 MR1Q95460 341 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 CLIP3Q96DZ5 547 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 OR2A14Q96R47 310 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 SLC7A5P2Q9GIP4 190 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 XAB2Q9HCS7 855 aaKnown RBP17.11■□□□□ 0.33
TPM4-206ENST00000587201 SNX12Q9UMY4 172 aa17.11■□□□□ 0.33
TPM4-206ENST00000587201 HEMK1Q9Y5R4 338 aaPredicted RBP17.11■□□□□ 0.33
TPM4-206ENST00000587201 A0A0J9YY10 115 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 MAGEB16A2A368 324 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 CDC14CA4D256 554 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 SDR42E2A6NKP2 422 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 ZNF185O15231 689 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 SLCO2B1O94956 709 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 MSL3P1P0C860 447 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 PKLRP30613 574 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 FNTAP49354 379 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 RAB28P51157 221 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 RPS15P62841 145 aaKnown RBP17.1■□□□□ 0.33
TPM4-206ENST00000587201 GPS2Q13227 327 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 DHX34Q14147 1143 aaKnown RBP17.1■□□□□ 0.33
TPM4-206ENST00000587201 KIR2DS3Q14952 304 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 KYNUQ16719 465 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 TYSND1Q2T9J0 566 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 CTSL3PQ5NE16 218 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 ARMC3Q5W041 872 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 TTC23LQ6PF05 361 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 UNC5DQ6UXZ4 953 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 CDHR3Q6ZTQ4 885 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 DCUN1D3Q8IWE4 304 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 SLC38A9Q8NBW4 561 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 MCUQ8NE86 351 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 APOBEC4Q8WW27 367 aaKnown RBP17.1■□□□□ 0.33
TPM4-206ENST00000587201 ZNF669Q96BR6 464 aaPredicted RBP17.1■□□□□ 0.33
TPM4-206ENST00000587201 TCTN2Q96GX1 697 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms