RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 KRT35Q92764 455 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 ULK4Q96C45 1275 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 DCUN1D1Q96GG9 259 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 MESP1Q9BRJ9 268 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 SLC7A5P2Q9GIP4 190 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 NHEJ1Q9H9Q4 299 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-225ENST00000586385 ZDHHC3Q9NYG2 299 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 NOVA2Q9UNW9 492 aaKnown RBP11.46□□□□□ -0.57
BRCA1-225ENST00000586385 ALG6Q9Y672 507 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 PRSS21Q9Y6M0 314 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 AP1M2Q9Y6Q5 423 aa11.46□□□□□ -0.57
BRCA1-225ENST00000586385 ANKRD17O75179 2603 aaKnown RBP11.45□□□□□ -0.58
BRCA1-225ENST00000586385 FBN2P35556 2912 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 HACD1B0YJ81 288 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 ZSCAN9O15535 394 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-225ENST00000586385 SPOPO43791 374 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 ANXA9O76027 345 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 ALPPP05187 535 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 CHRM5P08912 532 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-225ENST00000586385 ITGALP20701 1170 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 ACRV1P26436 265 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 TNNT3P45378 269 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-225ENST00000586385 RPA4Q13156 261 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 SPARCL1Q14515 664 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 BBS12Q6ZW61 710 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 SERPINA9Q86WD7 417 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 KATNAL2Q8IYT4 538 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 GPR135Q8IZ08 494 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 ZADH2Q8N4Q0 377 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 PTERQ96BW5 349 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 DNAJC1Q96KC8 554 aaKnown RBP11.45□□□□□ -0.58
BRCA1-225ENST00000586385 WDR77Q9BQA1 342 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-225ENST00000586385 HEMGNQ9BXL5 484 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 SLC6A20Q9NP91 592 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 IFT80Q9P2H3 777 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-225ENST00000586385 FBXL4Q9UKA2 621 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.45□□□□□ -0.584e-6■■□□□ 13.9
BRCA1-225ENST00000586385 OTOGQ6ZRI0 2925 aa11.45□□□□□ -0.58
BRCA1-225ENST00000586385 CCDC78A2IDD5 438 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 BHMG1C9JSJ3 638 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-225ENST00000586385 AGPSO00116 658 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 IFRD1O00458 451 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-225ENST00000586385 PEX12O00623 359 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 SOCS6O14544 535 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 LRRTM2O43300 516 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 IPO13O94829 963 aaKnown RBP11.44□□□□□ -0.58
BRCA1-225ENST00000586385 ONECUT2O95948 504 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 RALBP11234 206 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 MC4RP32245 332 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 HADHBP55084 474 aaKnown RBP11.44□□□□□ -0.58
BRCA1-225ENST00000586385 Q0VFX4 171 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 DBN1Q16643 649 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 ODF2Q5BJF6 829 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 ANKRD20A2Q5SQ80 823 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 ANKRD20A1Q5TYW2 823 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 ANKRD20A3Q5VUR7 823 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 NAPRTQ6XQN6 538 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 COX15Q7KZN9 410 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 LMNTD1Q8N9Z9 388 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 GRHL3Q8TE85 626 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 PPP4R1Q8TF05 950 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 HEXDCQ8WVB3 486 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 SPSB2Q99619 263 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 FAM118BQ9BPY3 351 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 C19orf43Q9BQ61 176 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 C17orf62Q9BQA9 187 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 AP1M1Q9BXS5 423 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 UNKQ9C0B0 810 aaKnown RBP11.44□□□□□ -0.58
BRCA1-225ENST00000586385 ARNT2Q9HBZ2 717 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 ATP13A2Q9NQ11 1180 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 ABHD10Q9NUJ1 306 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 PLAGL1Q9UM63 463 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 TFR2Q9UP52 801 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 OSGIN2Q9Y236 505 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 KLHL20Q9Y2M5 609 aa11.44□□□□□ -0.58
BRCA1-225ENST00000586385 CCDC88CQ9P219 2028 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 DIDO1Q9BTC0 2240 aaKnown RBP11.43□□□□□ -0.58
BRCA1-225ENST00000586385 A0A0J9YY10 115 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 CFAP99D6REC4 459 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 H7C0C1 242 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 H7C0S8 307 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 APOC4-APOC2K7ER74 178 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 ZG16O60844 167 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 ZRANB2O95218 330 aaKnown RBP eCLIP11.43□□□□□ -0.58
BRCA1-225ENST00000586385 IGHEP01854 428 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 APOC2P02655 101 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 MMP11P24347 488 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 ITGA3P26006 1051 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 SHMT2P34897 504 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 TSFMP43897 325 aaKnown RBP11.43□□□□□ -0.58
BRCA1-225ENST00000586385 ATP5OP48047 213 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 AIMP2Q13155 320 aaKnown RBP11.43□□□□□ -0.58
BRCA1-225ENST00000586385 ELOAQ14241 798 aaKnown RBP11.43□□□□□ -0.58
BRCA1-225ENST00000586385 ZRSR2Q15696 482 aaKnown RBP11.43□□□□□ -0.58
BRCA1-225ENST00000586385 GPR33Q49SQ1 333 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 KCTD11Q693B1 232 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 KIRREL2Q6UWL6 708 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 RCOR2Q8IZ40 523 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 DTWD1Q8N5C7 304 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 CCDC110Q8TBZ0 833 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms