RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 GTPBP2Q9BX10 602 aaKnown RBP12.36□□□□□ -0.43
VMP1-202ENST00000585847 DRC3Q9H069 523 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 TMEM168Q9H0V1 697 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 DPEP2Q9H4A9 486 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 MLXIPLQ9NP71 852 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 PFDN4Q9NQP4 134 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 DNAAF2Q9NVR5 837 aaKnown RBP12.36□□□□□ -0.43
VMP1-202ENST00000585847 UCKL1Q9NWZ5 548 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 RNF112Q9ULX5 631 aa12.36□□□□□ -0.43
VMP1-202ENST00000585847 CEP295Q9C0D2 2601 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 TK2O00142 265 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 BTN3A1O00481 513 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 GRID2O43424 1007 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 SNX3O60493 162 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 SNX2O60749 519 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 SDC3O75056 442 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 SLCO2B1O94956 709 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 RASGRP1O95267 797 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 TRIM16O95361 564 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 TNFP01375 233 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 RPN2P04844 631 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 FGF3P11487 239 aaPredicted RBP12.35□□□□□ -0.43
VMP1-202ENST00000585847 AK4P27144 223 aaPredicted RBP12.35□□□□□ -0.43
VMP1-202ENST00000585847 EPHA8P29322 1005 aaPredicted RBP12.35□□□□□ -0.43
VMP1-202ENST00000585847 GNPDA1P46926 289 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 ALDH18A1P54886 795 aaKnown RBP12.35□□□□□ -0.43
VMP1-202ENST00000585847 HERVK_113P63132 956 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 IRX1P78414 480 aaPredicted RBP12.35□□□□□ -0.43
VMP1-202ENST00000585847 SHC2P98077 582 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 BST1Q10588 318 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 C1orf61Q13536 156 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 RCN2Q14257 317 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 ZNF460Q14592 562 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 TMEM220Q6QAJ8 160 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 IL27RAQ6UWB1 636 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 DBX2Q6ZNG2 339 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 DET1Q7L5Y6 550 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 EFL1Q7Z2Z2 1120 aaKnown RBP12.35□□□□□ -0.43
VMP1-202ENST00000585847 RD3Q7Z3Z2 195 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 CLDN19Q8N6F1 224 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 BEND7Q8N7W2 519 aaPredicted RBP12.35□□□□□ -0.43
VMP1-202ENST00000585847 SIDT2Q8NBJ9 832 aaKnown RBP12.35□□□□□ -0.43
VMP1-202ENST00000585847 FBXO15Q8NCQ5 510 aaPredicted RBP12.35□□□□□ -0.43
VMP1-202ENST00000585847 GIMAP7Q8NHV1 300 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 HM13Q8TCT9 377 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 MAGEC3Q8TD91 643 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 GPBAR1Q8TDU6 330 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 ZNF473Q8WTR7 871 aaKnown RBP12.35□□□□□ -0.43
VMP1-202ENST00000585847 ANKRD49Q8WVL7 239 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 ATL1Q8WXF7 558 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 FOPNLQ96NB1 174 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 OR2M4Q96R27 311 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 ATOH8Q96SQ7 321 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 EDEM2Q9BV94 578 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 ERVK-6Q9BXR3 956 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 ALG9Q9H6U8 611 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 CARS2Q9HA77 564 aaKnown RBP12.35□□□□□ -0.43
VMP1-202ENST00000585847 FGFR1OP2Q9NVK5 253 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 VTI1BQ9UEU0 232 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 APOBEC3BQ9UH17 382 aaKnown RBP12.35□□□□□ -0.43
VMP1-202ENST00000585847 MOSPD1Q9UJG1 213 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 OARD1Q9Y530 152 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 CFAP47Q6ZTR5 3102 aa12.35□□□□□ -0.43
VMP1-202ENST00000585847 CNOT1A5YKK6 2376 aaKnown RBP12.34□□□□□ -0.43
VMP1-202ENST00000585847 OR2AG2A6NM03 316 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 A8MT66 165 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 EBAG9O00559 213 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 ZBTB14O43829 449 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 GPC4O75487 556 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 KCNK5O95279 499 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 CER1O95813 267 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 MLYCDO95822 493 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 HIST1H2AGP0C0S8 130 aaPredicted RBP12.34□□□□□ -0.43
VMP1-202ENST00000585847 ZNF883P0CG24 379 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 HIST1H2ADP20671 130 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 IMPDH1P20839 514 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 CYP2A7P20853 494 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 BGNP21810 368 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 GLRBP48167 497 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 ABCE1P61221 599 aaKnown RBP12.34□□□□□ -0.43
VMP1-202ENST00000585847 HNRNPKP61978 463 aaKnown RBP eCLIP12.34□□□□□ -0.43
VMP1-202ENST00000585847 DLG1Q12959 904 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 CDC16Q13042 620 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 TCEA2Q15560 299 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 PLA2G4EQ3MJ16 856 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 SPDYAQ5MJ70 313 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 TTC19Q6DKK2 380 aaPredicted RBP12.34□□□□□ -0.43
VMP1-202ENST00000585847 C16orf46Q6P387 395 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 CRTC3Q6UUV7 619 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 TMEM207Q6UWW9 146 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 FAM83HQ6ZRV2 1179 aaPredicted RBP12.34□□□□□ -0.43
VMP1-202ENST00000585847 LRRTM4Q86VH4 590 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 GATAD2AQ86YP4 633 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 GPSM1Q86YR5 675 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 C10orf107Q8IVU9 208 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 SFTPA2Q8IWL1 248 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 CPNE9Q8IYJ1 553 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 FBXO39Q8N4B4 442 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 PDPRQ8NCN5 879 aa12.34□□□□□ -0.43
VMP1-202ENST00000585847 ZNF548Q8NEK5 533 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms