RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 PADI1Q9ULC6 663 aa18.21■□□□□ 0.51
ATG4D-203ENST00000585752 IGHV5-51A0A0C4DH38 117 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 GSAPA4D1B5 854 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 MATN2O00339 956 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 NKX2-8O15522 239 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 NDUFS3O75489 264 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 AP2A2O94973 939 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 ZBTB11O95625 1053 aaPredicted RBP18.2■□□□□ 0.5
ATG4D-203ENST00000585752 OR56A5P0C7T3 313 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 CDH3P22223 829 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 CDC20Q12834 499 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 LONRF1Q17RB8 773 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 DUPD1Q68J44 220 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 CAPRIN2Q6IMN6 1127 aaKnown RBP18.2■□□□□ 0.5
ATG4D-203ENST00000585752 CENPUQ71F23 418 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.2■□□□□ 0.5
ATG4D-203ENST00000585752 SPDYE1Q8NFV5 336 aaPredicted RBP18.2■□□□□ 0.5
ATG4D-203ENST00000585752 CALML6Q8TD86 181 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 LRRC39Q96DD0 335 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 SIGLEC10Q96LC7 697 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 RMDN2Q96LZ7 410 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 FCRL4Q96PJ5 515 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 EBNA1BP2Q99848 306 aaKnown RBP18.2■□□□□ 0.5
ATG4D-203ENST00000585752 COG4Q9H9E3 785 aa18.2■□□□□ 0.5
ATG4D-203ENST00000585752 GEMIN8Q9NWZ8 242 aaKnown RBP18.2■□□□□ 0.5
ATG4D-203ENST00000585752 FASNP49327 2511 aaKnown RBP18.2■□□□□ 0.5
ATG4D-203ENST00000585752 IGLV3-16A0A075B6K0 115 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 FTH1P02794 183 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 EBLN1P0CF75 366 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 ZNF28P17035 718 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 POLR2CP19387 275 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-203ENST00000585752 CD151P48509 253 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 POLE2P56282 527 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 PPP1CAP62136 330 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 SLC7A5Q01650 507 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 RPA4Q13156 261 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 DEFB109BQ30KR1 87 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 SYTL3Q4VX76 610 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 RNF187Q5TA31 235 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-203ENST00000585752 PACS1Q6VY07 963 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 TMEM126BQ8IUX1 230 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 CARFQ8N187 725 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 MMGT1Q8N4V1 131 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 CFAP36Q96G28 342 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 SLC41A2Q96JW4 573 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 LRRC1Q9BTT6 524 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 SLC7A5P2Q9GIP4 190 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 MVB12BQ9H7P6 319 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 C20orf96Q9NUD7 363 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-203ENST00000585752 ZC3H7BQ9UGR2 993 aaKnown RBP18.19■□□□□ 0.5
ATG4D-203ENST00000585752 CROTQ9UKG9 612 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 CHMP2BQ9UQN3 213 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 VPS9D1Q9Y2B5 631 aa18.19■□□□□ 0.5
ATG4D-203ENST00000585752 GOLGA8KD6RF30 607 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 GOLGA8TH3BQL2 631 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 KALRNO60229 2985 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 KDM1AO60341 852 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 FOLR1P15328 257 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 ELK3P41970 407 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 ARCN1P48444 511 aaKnown RBP18.18■□□□□ 0.5
ATG4D-203ENST00000585752 PLTPP55058 493 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 GUCY2DQ02846 1103 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 PDIA2Q13087 525 aaKnown RBP18.18■□□□□ 0.5
ATG4D-203ENST00000585752 KCNAB2Q13303 367 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 KCNAB1Q14722 419 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 GLE1Q53GS7 698 aaKnown RBP18.18■□□□□ 0.5
ATG4D-203ENST00000585752 SPANXN3Q5MJ09 141 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 HP1BP3Q5SSJ5 553 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-203ENST00000585752 NEPROQ6NW34 567 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 TMEM135Q86UB9 458 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 APOBEC4Q8WW27 367 aaKnown RBP18.18■□□□□ 0.5
ATG4D-203ENST00000585752 ELMO1Q92556 727 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 FAM167BQ9BTA0 163 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 CARD6Q9BX69 1037 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 PPANQ9NQ55 473 aaKnown RBP18.18■□□□□ 0.5
ATG4D-203ENST00000585752 FGF21Q9NSA1 209 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 IL17BQ9UHF5 180 aa18.18■□□□□ 0.5
ATG4D-203ENST00000585752 SMG1Q96Q15 3661 aaKnown RBP18.17■□□□□ 0.5
ATG4D-203ENST00000585752 LIN7AO14910 233 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-203ENST00000585752 SGTAO43765 313 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 BANF1O75531 89 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 KLK3P07288 261 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-203ENST00000585752 OGNP20774 298 aaKnown RBP18.17■□□□□ 0.5
ATG4D-203ENST00000585752 TUBB4BP68371 445 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 ERV3-1Q14264 604 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 CRYMQ14894 314 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 MSS51Q4VC12 460 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 ZNF470Q6ECI4 717 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 PTRHD1Q6GMV3 140 aaKnown RBP18.17■□□□□ 0.5
ATG4D-203ENST00000585752 ATG14Q6ZNE5 492 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 MICALCLQ6ZW33 695 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 LDB1Q86U70 411 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-203ENST00000585752 LILRA3Q8N6C8 439 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-203ENST00000585752 CLDN19Q8N6F1 224 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 OR8K5Q8NH50 307 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 TFGQ92734 400 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-203ENST00000585752 N4BP2L2Q92802 583 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-203ENST00000585752 PWWP2AQ96N64 755 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 TCF12Q99081 682 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 TRIM56Q9BRZ2 755 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms