RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 TAS2R13Q9NYV9 303 aa13.42□□□□□ -0.26
PRKCSH-202ENST00000585540 MOCS1Q9NZB8 636 aa13.42□□□□□ -0.26
PRKCSH-202ENST00000585540 ZFATQ9P243 1243 aa13.42□□□□□ -0.26
PRKCSH-202ENST00000585540 MTRF1LQ9UGC7 380 aaKnown RBP13.42□□□□□ -0.26
PRKCSH-202ENST00000585540 POMT2Q9UKY4 750 aa13.42□□□□□ -0.26
PRKCSH-202ENST00000585540 DHRS7Q9Y394 339 aa13.42□□□□□ -0.26
PRKCSH-202ENST00000585540 A0A1W2PNU3 283 aaPredicted RBP13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 IQCF5A8MTL0 148 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 NIPSNAP2O75323 286 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 CATP04040 527 aaKnown RBP13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 F7P08709 466 aaPredicted RBP13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 ITGB6P18564 788 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 NELFEP18615 380 aaKnown RBP13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 GFERP55789 205 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 CTBP1Q13363 440 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 NAB1Q13506 487 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 MAP7Q14244 749 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 KIR2DS3Q14952 304 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 TMTC4Q5T4D3 741 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 TEDDM1Q5T9Z0 273 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 BROXQ5VW32 411 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 FAM129CQ86XR2 697 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 PALM2Q8IXS6 379 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 KRT222Q8N1A0 295 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 BMPERQ8N8U9 685 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 RCBTB1Q8NDN9 531 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 HMGCLL1Q8TB92 370 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 KCNE4Q8WWG9 221 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 INPP5DQ92835 1189 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 FANCEQ9HB96 536 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 PPANQ9NQ55 473 aaKnown RBP13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 FBXO6Q9NRD1 293 aaPredicted RBP13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 ZDHHC18Q9NUE0 388 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 SIDT1Q9NXL6 827 aaKnown RBP13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 TMEM9Q9P0T7 183 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 BTRCQ9Y297 605 aa13.41□□□□□ -0.26
PRKCSH-202ENST00000585540 APC2O95996 2303 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 PIPSLA2A3N6 862 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 OR6C74A6NCV1 312 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 SRRM3A6NNA2 597 aaPredicted RBP13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 EFCAB7A8K855 629 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 STMND1H3BQB6 276 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 POLR1CO15160 346 aaPredicted RBP13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 MATN4O95460 622 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 RHOXF2BP0C7M4 288 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 FGF3P11487 239 aaPredicted RBP13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 SLC5A2P31639 672 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 STX2P32856 288 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 ARL4DP49703 201 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 ATP1A2P50993 1020 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 CLCN7P51798 805 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 MAPK10P53779 464 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 HSD11B2P80365 405 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 ARHGAP19Q14CB8 494 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 BRD3Q15059 726 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 SNAP47Q5SQN1 464 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 TEX35Q5T0J7 233 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 FOXR1Q6PIV2 292 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 D2HGDHQ8N465 521 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 SIDT2Q8NBJ9 832 aaKnown RBP13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 OR4E2Q8NGC2 313 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 OR5AR1Q8NGP9 310 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 RHOXF2Q9BQY4 288 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 PITPNM3Q9BZ71 974 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 FAM117AQ9C073 453 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 PDE7BQ9NP56 450 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 SAYSD1Q9NPB0 183 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 SLC39A1Q9NY26 324 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 TRMT6Q9UJA5 497 aaKnown RBP13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 KIF26BQ2KJY2 2108 aa13.4□□□□□ -0.26
PRKCSH-202ENST00000585540 PRAMEF33A0A0G2JMD5 474 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 RASGRF2O14827 1237 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 CASC3O15234 703 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 TLX3O43711 291 aaPredicted RBP13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 PSIP1O75475 530 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 C1orf105O95561 183 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 MT-ND3P03897 115 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 ERVK-10P10266 1014 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 ITIH1P19827 911 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 CDH3P22223 829 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 ECHS1P30084 290 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 PKLRP30613 574 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 ABCG1P45844 678 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 CARSP49589 748 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 MPP1Q00013 466 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 SP140Q13342 867 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 SLC5A12Q1EHB4 618 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 ANKS6Q68DC2 871 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 CAPN12Q6ZSI9 719 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 CCDC25Q86WR0 208 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 RELL1Q8IUW5 271 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 ADGRF3Q8IZF5 1079 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 OR2L8Q8NGY9 312 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 CD200R1Q8TD46 325 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 SKA2Q8WVK7 121 aaPredicted RBP13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 USP7Q93009 1102 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 EFHD1Q9BUP0 239 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 POPDC3Q9HBV1 291 aa13.39□□□□□ -0.27
PRKCSH-202ENST00000585540 INTS7Q9NVH2 962 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms