RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 BLOC1S5Q8TDH9 187 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CHFRQ96EP1 664 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 EXOC2Q96KP1 924 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ZNF597Q96LX8 424 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 RPRD1AQ96P16 312 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 VAT1Q99536 393 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 RASSF1Q9NS23 344 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 MAP10Q9P2G4 905 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 KLHL9Q9P2J3 617 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 A0A1W2PPW3 197 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 PRDX3P30048 256 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 SLC26A3P40879 764 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 DCTN2Q13561 401 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 LRRC26Q2I0M4 334 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 LDLRAP1Q5SW96 308 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 TMEM26Q6ZUK4 368 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 LINC00523Q86TU6 105 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 RALGPS2Q86X27 583 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CARM1Q86X55 608 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 PTGR2Q8N8N7 351 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 RTL3Q8N8U3 475 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 FBXO22Q8NEZ5 403 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 OR13C4Q8NGS5 318 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 HCAR2Q8TDS4 363 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 DLG3Q92796 817 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 EFHD2Q96C19 240 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 C12orf43Q96C57 262 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 GSTO2Q9H4Y5 243 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 WBP1LQ9NX94 342 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 DNAJC15Q9Y5T4 150 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 NUP214P35658 2090 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ABHD14A-ACY1A0A1B0GW23 586 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 UBA6A0AVT1 1052 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 J3QRK9 145 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 EI24O14681 340 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 TXNL1O43396 289 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ATE1O95260 518 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 S100A9P06702 114 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 LBX1P52954 281 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 NCF4Q15080 339 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CYP51A1Q16850 503 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CYP27C1Q4G0S4 372 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 THNSL2Q86YJ6 484 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CMTR2Q8IYT2 770 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 RDH11Q8TC12 318 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 FBXL8Q96CD0 374 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 C19orf60Q96EN9 201 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ACOX2Q99424 681 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 SMOC2Q9H3U7 446 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 RYDENQ9NUL5 291 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 UXTQ9UBK9 157 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 RAD54BQ9Y620 910 aa11.39□□□□□ -0.59
CDK5RAP3-231ENST00000584063 TRBV23OR9-2A0A075B6M9 112 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 MTMR11A4FU01 709 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 SLCO1B7G3V0H7 640 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 GIPC1O14908 333 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 SYN3O14994 580 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 NDUFS6O75380 124 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ANXA9O76027 345 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 IFNA14P01570 189 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 HGFP14210 728 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ZNF23P17027 643 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 EEF1B2P24534 225 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 HMOX2P30519 316 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 KCNJ5P48544 419 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 MNX1P50219 401 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 GEMP55040 296 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 STX1BP61266 288 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 PIGFQ07326 219 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 PMS2P3Q13401 168 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 POLD3Q15054 466 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 UGP2Q16851 508 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 MS4A13Q5J8X5 152 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 FGD3Q5JSP0 725 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 OGFOD2Q6N063 350 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CNTN4Q8IWV2 1026 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 Q8NFD4 153 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CEP76Q8TAP6 659 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ATL1Q8WXF7 558 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 TMEM169Q96HH4 297 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CAMK1GQ96NX5 476 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CDK5RAP1Q96SZ6 601 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 EPB41L1Q9H4G0 881 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 ARMC7Q9H6L4 198 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 SLC35C2Q9NQQ7 365 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 CAB39Q9Y376 341 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 GPR39O43194 453 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 FZD6O60353 706 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 SNAP29O95721 258 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 GFAPP14136 432 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 SLC7A1P30825 629 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 GGT5P36269 586 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 PRKAA2P54646 552 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 BNIP3Q12983 259 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 GFOD2Q3B7J2 385 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 LRIT3Q3SXY7 679 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 USP39Q53GS9 565 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 UNC50Q53HI1 259 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 KRTCAP3Q53RY4 240 aa11.38□□□□□ -0.59
CDK5RAP3-231ENST00000584063 NHSL2Q5HYW2 709 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms