RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 CCDC186Q7Z3E2 898 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 ARHGAP22Q7Z5H3 698 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 SLFN11Q7Z7L1 901 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 PLD3Q8IV08 490 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 FOXP4Q8IVH2 680 aaPredicted RBP5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 TRIML1Q8N9V2 468 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 CAMKVQ8NCB2 501 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 PPFIBP2Q8ND30 876 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 LRRC8CQ8TDW0 803 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 SSMEM1Q8WWF3 244 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 ARSGQ96EG1 525 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 SGK494Q96LW2 274 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 FER1L6-AS2Q96M78 137 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 NODALQ96S42 347 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 BICC1Q9H694 974 aaKnown RBP5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 A4GALTQ9NPC4 353 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 SERINC1Q9NRX5 453 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 ANAPC5Q9UJX4 755 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 CPSF3Q9UKF6 684 aaKnown RBP5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 MTUS1Q9ULD2 1270 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 ABT1Q9ULW3 272 aaKnown RBP5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 NME7Q9Y5B8 376 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 FLT1P17948 1338 aa5.19□□□□□ -1.58
SMARCE1-219ENST00000583294 PLOD2O00469 737 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 ZNF432O94892 652 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 HSPA4LO95757 839 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 RAB40ALP0C0E4 278 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 JAK1P23458 1154 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 PLA2G4FQ68DD2 849 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 LINGO4Q6UY18 593 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 ZNF554Q86TJ5 538 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 TICAM2Q86XR7 235 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 MFN1Q8IWA4 741 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 LMNTD1Q8N9Z9 388 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 OR1J1Q8NGS3 322 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 KIF18AQ8NI77 898 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 OLIG1Q8TAK6 271 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 ATL1Q8WXF7 558 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 IRGQQ8WZA9 623 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 SIPA1Q96FS4 1042 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 RHNO1Q9BSD3 238 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 MMP28Q9H239 520 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 ARRDC1-AS1Q9H2J1 176 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 LRWD1Q9UFC0 647 aa5.18□□□□□ -1.58
SMARCE1-219ENST00000583294 WDR81Q562E7 1941 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 A0A1W2PPQ1 181 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 EME2A4GXA9 379 aaPredicted RBP5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 CIDEAO60543 219 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 SLC22A3O75751 556 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 ACSL3O95573 720 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 CAVIN2O95810 425 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 PENKP01210 267 aaPredicted RBP5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 ATP5BP06576 529 aaKnown RBP5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 FGF5P12034 268 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 FDPSP14324 419 aaKnown RBP5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 DCTP40126 519 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 PDX1P52945 283 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 LINC01547P58512 204 aaPredicted RBP5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 PHEXP78562 749 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 FAM133BQ5BKY9 247 aaKnown RBP5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 TECRLQ5HYJ1 363 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 WDR38Q5JTN6 314 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 SPECC1Q5M775 1068 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 DCAF10Q5QP82 559 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 ELFN2Q5R3F8 820 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 NUP54Q7Z3B4 507 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 TMEM139Q8IV31 216 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 OTUB1Q96FW1 271 aaPredicted RBP5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 CPNE1Q99829 537 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 ZNF334Q9HCZ1 680 aaPredicted RBP5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 ECHDC1Q9NTX5 307 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 PCDH11YQ9BZA8 1340 aa5.17□□□□□ -1.58
SMARCE1-219ENST00000583294 FAM172BPA6NC97 362 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 NEMP2A6NFY4 417 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 PTAFRP25105 342 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 SLC6A6P31641 620 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 HSPA4P34932 840 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 NR2C2P49116 596 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 POLR2LP62875 67 aaKnown RBP5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 MZT1Q08AG7 82 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 HYAL4Q2M3T9 481 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 KLHL22Q53GT1 634 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 SYT14P1Q58G82 188 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 CCNYL2Q5T2Q4 361 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 SLC27A1Q6PCB7 646 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 PPP1R21Q6ZMI0 780 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 TRMT1LQ7Z2T5 733 aaKnown RBP5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 VSIG1Q86XK7 387 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 ZNF843Q8N446 348 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 STPG4Q8N801 248 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 NPEPL1Q8NDH3 523 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 KLHDC9Q8NEP7 349 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 GRHL3Q8TE85 626 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 CCDC107Q8WV48 283 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 ROBO4Q8WZ75 1007 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 HSD17B8Q92506 261 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 SLC47A1Q96FL8 570 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 THOC1Q96FV9 657 aaKnown RBP5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 NSL1Q96IY1 281 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms