RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 SPHK1Q9NYA1 384 aa15.59■□□□□ 0.09
SREBF1-221ENST00000583080 TRHDEQ9UKU6 1024 aa15.59■□□□□ 0.09
SREBF1-221ENST00000583080 NOVA2Q9UNW9 492 aaKnown RBP15.59■□□□□ 0.09
SREBF1-221ENST00000583080 AP1M2Q9Y6Q5 423 aa15.59■□□□□ 0.09
SREBF1-221ENST00000583080 ANKRD17O75179 2603 aaKnown RBP15.58■□□□□ 0.08
SREBF1-221ENST00000583080 IGLV3-16A0A075B6K0 115 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 SYCE3A1L190 88 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 C5orf60A6NFR6 353 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 PSTPIP1O43586 416 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 IPO13O94829 963 aaKnown RBP15.58■□□□□ 0.08
SREBF1-221ENST00000583080 ITGA3P26006 1051 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 PSMB4P28070 264 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 MC4RP32245 332 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 CD151P48509 253 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 SOX8P57073 446 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 CYP2A13Q16696 494 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 TFDP3Q5H9I0 405 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 UNC5AQ6ZN44 842 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 OR8K1Q8NGG5 319 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 WDR77Q9BQA1 342 aaPredicted RBP15.58■□□□□ 0.08
SREBF1-221ENST00000583080 SLC6A20Q9NP91 592 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 SLC22A11Q9NSA0 550 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 FBXL4Q9UKA2 621 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.58■□□□□ 0.083e-10■■□□□ 13
SREBF1-221ENST00000583080 ANKRD12Q6UB98 2062 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 DOCK10Q96BY6 2186 aa15.58■□□□□ 0.08
SREBF1-221ENST00000583080 ARHGAP10A1A4S6 786 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 HACD1B0YJ81 288 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 LRRTM2O43300 516 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 ANXA9O76027 345 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 IGHEP01854 428 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 CHRM5P08912 532 aaPredicted RBP15.57■□□□□ 0.08
SREBF1-221ENST00000583080 TPBGLP0DKB5 382 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 ITGAXP20702 1163 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 ANP32AP39687 249 aaKnown RBP15.57■□□□□ 0.08
SREBF1-221ENST00000583080 NKAIN1Q4KMZ8 207 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 HOOK3Q86VS8 718 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 KCNMB4Q86W47 210 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 CLDN19Q8N6F1 224 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.57■□□□□ 0.08
SREBF1-221ENST00000583080 MARVELD3Q96A59 401 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 PTERQ96BW5 349 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 DNAJC1Q96KC8 554 aaKnown RBP15.57■□□□□ 0.08
SREBF1-221ENST00000583080 AP1M1Q9BXS5 423 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 ATP13A2Q9NQ11 1180 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 AGPAT4Q9NRZ5 378 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 TXLNGQ9NUQ3 528 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 IRAK4Q9NWZ3 460 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 ZDHHC3Q9NYG2 299 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 PLAGL1Q9UM63 463 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 SRPK3Q9UPE1 567 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 OSGIN2Q9Y236 505 aa15.57■□□□□ 0.08
SREBF1-221ENST00000583080 TRBV5-4A0A0C4DH59 114 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 A0A0J9YY10 115 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 H7C0C1 242 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 AGPSO00116 658 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 KLHL41O60662 606 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 CRTAMO95727 393 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 POU3F2P20265 443 aaPredicted RBP15.56■□□□□ 0.08
SREBF1-221ENST00000583080 ACRV1P26436 265 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 PEBP1P30086 187 aaKnown RBP15.56■□□□□ 0.08
SREBF1-221ENST00000583080 SHMT2P34897 504 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 ATP5OP48047 213 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 RPA4Q13156 261 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 SPARCL1Q14515 664 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 ITPRIPL1Q6GPH6 555 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 DENND5AQ6IQ26 1287 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 SERPINA9Q86WD7 417 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 CCDC50Q8IVM0 306 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 FAM20CQ8IXL6 584 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 KATNAL2Q8IYT4 538 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 GRHL3Q8TE85 626 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 PPP4R1Q8TF05 950 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 HEXDCQ8WVB3 486 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 HEMGNQ9BXL5 484 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 NHEJ1Q9H9Q4 299 aaPredicted RBP15.56■□□□□ 0.08
SREBF1-221ENST00000583080 ABHD10Q9NUJ1 306 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 SVILO95425 2214 aa15.56■□□□□ 0.08
SREBF1-221ENST00000583080 GOLGA6L19H0YKK7 550 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 ZG16O60844 167 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 GCGRP47871 477 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 AIMP2Q13155 320 aaKnown RBP15.55■□□□□ 0.08
SREBF1-221ENST00000583080 TCEAL1Q15170 157 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 ZRSR2Q15696 482 aaKnown RBP15.55■□□□□ 0.08
SREBF1-221ENST00000583080 GPR33Q49SQ1 333 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 NAPRTQ6XQN6 538 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 BBS12Q6ZW61 710 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 PIANPQ8IYJ0 282 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 DNAJC22Q8N4W6 341 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 KRT35Q92764 455 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 CNDP1Q96KN2 507 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 CCDC42Q96M95 316 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 FAM118BQ9BPY3 351 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 UNKQ9C0B0 810 aaKnown RBP15.55■□□□□ 0.08
SREBF1-221ENST00000583080 CHRNA10Q9GZZ6 450 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 VPS37BQ9H9H4 285 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 ASF1AQ9Y294 204 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 KLHL20Q9Y2M5 609 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 ALG6Q9Y672 507 aa15.55■□□□□ 0.08
SREBF1-221ENST00000583080 PRSS21Q9Y6M0 314 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms