RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 UBFD1O14562 309 aaKnown RBP9.08□□□□□ -0.96
SS18-220ENST00000582092 CLGNO14967 610 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 AP1G1O43747 822 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 LRP3O75074 770 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 ATP6AP2O75787 350 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 KLF8O95600 359 aaPredicted RBP9.08□□□□□ -0.96
SS18-220ENST00000582092 KRT6AP02538 564 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 KRT6BP04259 564 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 RETP07949 1114 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 SNRPB2P08579 225 aaKnown RBP9.08□□□□□ -0.96
SS18-220ENST00000582092 HOXB2P14652 356 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 IDO1P14902 403 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 CA5AP35218 305 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 KRT6CP48668 564 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 PRLHRP49683 370 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 ATP4BP51164 291 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 HK3P52790 923 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 CDKL1Q00532 357 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 B4GALNT1Q00973 533 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 DPTQ07507 201 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 MESP2Q0VG99 397 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 RIPK1Q13546 671 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 CAMK2GQ13555 558 aaPredicted RBP9.08□□□□□ -0.96
SS18-220ENST00000582092 GSTA3Q16772 222 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 MAP7D1Q3KQU3 841 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 ATP6AP1LQ52LC2 224 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 IL27RAQ6UWB1 636 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 SBSNQ6UWP8 590 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 CYHR1Q6ZMK1 362 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 ATG14Q6ZNE5 492 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 LRRC70Q7Z2Q7 622 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 CACUL1Q86Y37 369 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 SFTPA1Q8IWL2 248 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 CFAP206Q8IYR0 622 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 MIER2Q8N344 545 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 BEND7Q8N7W2 519 aaPredicted RBP9.08□□□□□ -0.96
SS18-220ENST00000582092 RASGEF1AQ8N9B8 481 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 KYQ8NBH2 561 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 PCYOX1LQ8NBM8 494 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 RBM15BQ8NDT2 890 aaKnown RBP9.08□□□□□ -0.96
SS18-220ENST00000582092 OR14C36Q8NHC7 312 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 GAB3Q8WWW8 586 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 RHBDF1Q96CC6 855 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 LOXL4Q96JB6 756 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 SPACA7Q96KW9 195 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 MARK4Q96L34 752 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 CADM1Q9BY67 442 aaKnown RBP9.08□□□□□ -0.96
SS18-220ENST00000582092 RSPH9Q9H1X1 276 aaPredicted RBP9.08□□□□□ -0.96
SS18-220ENST00000582092 AKTIPQ9H8T0 292 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 ACTR8Q9H981 624 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 ZDHHC4Q9NPG8 344 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 PHPT1Q9NRX4 125 aaPredicted RBP9.08□□□□□ -0.96
SS18-220ENST00000582092 FBXL12Q9NXK8 326 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 POLG2Q9UHN1 485 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 ADAMTS6Q9UKP5 1117 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 SCML1Q9UN30 329 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 BTRCQ9Y297 605 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 TIMM22Q9Y584 194 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 OTOGLQ3ZCN5 2332 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 TBC1D3DA0A087WVF3 549 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 TBC1D3IA0A087WXS9 549 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 TBC1D3EA0A087X179 549 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 TBC1D3KA0A087X1G2 549 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 A0A1W2PP55 124 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 TBC1D3FA6NER0 549 aaPredicted RBP9.07□□□□□ -0.96
SS18-220ENST00000582092 MEI4A8MW99 385 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 TBC1D3LB9A6J9 549 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 E2F3O00716 465 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 CFLARO15519 480 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 RGS14O43566 566 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 MGRN1O60291 552 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 PEX11AO75192 247 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 ULK1O75385 1050 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 POP7O75817 140 aaKnown RBP9.07□□□□□ -0.96
SS18-220ENST00000582092 WFS1O76024 890 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 SLCO2B1O94956 709 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 WDR47O94967 919 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 CLDN9O95484 217 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 ATP6V1G2O95670 118 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 RPN2P04844 631 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 PCCBP05166 539 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 CAPN1P07384 714 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 TBC1D3HP0C7X1 549 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 CCND1P24385 295 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 HNRNPH1P31943 449 aaKnown RBP9.07□□□□□ -0.96
SS18-220ENST00000582092 NUDT2P50583 147 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 METAP1P53582 386 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 RPS21P63220 83 aaKnown RBP9.07□□□□□ -0.96
SS18-220ENST00000582092 MAD2L1Q13257 205 aaPredicted RBP9.07□□□□□ -0.96
SS18-220ENST00000582092 PHKG1Q16816 387 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 C1orf146Q5VVC0 180 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 TMEM198Q66K66 360 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 NAIF1Q69YI7 327 aaPredicted RBP9.07□□□□□ -0.96
SS18-220ENST00000582092 TBC1D3GQ6DHY5 549 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 TBC1D3CQ6IPX1 549 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 PNCKQ6P2M8 343 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 DOK6Q6PKX4 331 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 LARP4Q71RC2 724 aaKnown RBP eCLIP9.07□□□□□ -0.96
SS18-220ENST00000582092 KIAA2013Q8IYS2 634 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 DEFB107AQ8IZN7 70 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms