RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 MYOCOSA0A1B0GUC4 107 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 A0A1W2PQU0 124 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NPC1O15118 1278 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TSPAN6O43657 245 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CRCPO75575 148 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CDK14O94921 469 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 AGTR2P50052 363 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ADPRHP54922 357 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NME5P56597 212 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SH3BP2P78314 561 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MRPS21P82921 87 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 INPP5AQ14642 412 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 LIN52Q52LA3 116 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 AGKQ53H12 422 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 LYPLAL1Q5VWZ2 237 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 LAYNQ6UX15 382 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 BNC2Q6ZN30 1099 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PGBD3Q8N328 593 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CPSF7Q8N684 471 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 OR9I1Q8NGQ6 314 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 STAG3L4Q8TBR4 150 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SKA2Q8WVK7 121 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 KCNA7Q96RP8 456 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ATOH8Q96SQ7 321 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DERL2Q9GZP9 239 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 OCEL1Q9H607 264 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 EFCAB1Q9HAE3 211 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DUSP12Q9UNI6 340 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CA5BQ9Y2D0 317 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ASB1Q9Y576 335 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 COMMD10Q9Y6G5 202 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CKAP5Q14008 2032 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PSMD11O00231 422 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GUCA1CO95843 209 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GABRG2P18507 467 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 EEF1DP29692 281 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ARL1P40616 181 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FASTKQ14296 549 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GK3PQ14409 553 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PLA2G4EQ3MJ16 856 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TMEM220Q6QAJ8 160 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ZNF852Q6ZMS4 543 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ZBTB2Q8N680 514 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DDHD1Q8NEL9 900 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FAM81AQ8TBF8 368 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 KIAA1191Q96A73 305 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RAB7BQ96AH8 199 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 L3HYPDHQ96EM0 354 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DTNBP1Q96EV8 351 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MAELQ96JY0 434 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SERPINI1Q99574 410 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TRMOQ9BU70 441 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 WDR41Q9HAD4 459 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MEAF6Q9HAF1 191 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 POPDC3Q9HBV1 291 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 LATS2Q9NRM7 1088 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 EBF1Q9UH73 591 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PIKFYVEQ9Y2I7 2098 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 COL4A2P08572 1712 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FKBP6O75344 327 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 OR56A5P0C7T3 313 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RANBP1P43487 201 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PREPP48147 710 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ZP2Q05996 745 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TCEA2Q15560 299 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 KIF19Q2TAC6 998 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CRTC3Q6UUV7 619 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MBOAT1Q6ZNC8 495 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CYP2U1Q7Z449 544 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 HEATR4Q86WZ0 1026 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NRSN1Q8IZ57 195 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SIX5Q8N196 739 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NKAPQ8N5F7 415 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ULK4Q96C45 1275 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 C19orf60Q96EN9 201 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SLC39A3Q9BRY0 314 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TFB2MQ9H5Q4 396 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ZNF385DQ9H6B1 395 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SMOXQ9NWM0 555 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ATXN10Q9UBB4 475 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GULP1Q9UBP9 304 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FBXL21Q9UKT6 434 aa12.41□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SDK1Q7Z5N4 2213 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 LRRK1Q38SD2 2015 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 POM121CA8CG34 1229 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PSMD12O00232 456 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 KERAO60938 352 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ACADMP11310 421 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ETS2P15036 469 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TPMTP51580 245 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FOXA1P55317 472 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PHKG1Q16816 387 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 LRRC23Q53EV4 343 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CYHR1Q6ZMK1 362 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 KBTBD6Q86V97 674 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PDSS2Q86YH6 399 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RAVER1Q8IY67 606 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CLYBLQ8N0X4 340 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RLN3Q8WXF3 142 aa12.4□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ELMO1Q92556 727 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms