RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 SLC38A9Q8NBW4 561 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 PPHLN1Q8NEY8 458 aaKnown RBP13.27□□□□□ -0.29
GGA3-208ENST00000579743 OR5AR1Q8NGP9 310 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 OR4L1Q8NH43 312 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 OR5K2Q8NHB8 316 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 PEX13Q92968 403 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 HDAC10Q969S8 669 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 HES6Q96HZ4 224 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 NDC1Q9BTX1 674 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 AP1M1Q9BXS5 423 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 RBSNQ9H1K0 784 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 PCMTD2Q9NV79 361 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 INTS7Q9NVH2 962 aaKnown RBP13.27□□□□□ -0.29
GGA3-208ENST00000579743 PIH1D1Q9NWS0 290 aaKnown RBP13.27□□□□□ -0.29
GGA3-208ENST00000579743 NDOR1Q9UHB4 597 aa13.27□□□□□ -0.29
GGA3-208ENST00000579743 A0A0J9YY10 115 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 CCDC162PA2VCL2 907 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 KPNA5O15131 536 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 PFDN6O15212 129 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 DNAJB5O75953 348 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 SUN1O94901 812 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 CHRM5P08912 532 aaPredicted RBP13.26□□□□□ -0.29
GGA3-208ENST00000579743 PIM1P11309 404 aaPredicted RBP13.26□□□□□ -0.29
GGA3-208ENST00000579743 UGT2B7P16662 529 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 PSMA3P25788 255 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 RORAP35398 523 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 PTGIRP43119 386 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 GDF10P55107 478 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 MLLT10P55197 1068 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 DCDP81605 110 aaKnown RBP13.26□□□□□ -0.29
GGA3-208ENST00000579743 ABRQ12979 859 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 IL10RAQ13651 578 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 NCF4Q15080 339 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 ZNF658BQ4V348 819 aaPredicted RBP13.26□□□□□ -0.29
GGA3-208ENST00000579743 CCDC38Q502W7 563 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 TSTD2Q5T7W7 516 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 TLDC1Q6P9B6 456 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 CDHR3Q6ZTQ4 885 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 PROKR1Q8TCW9 393 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 MAIP1Q8WWC4 291 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 DLG3Q92796 817 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 MIB2Q96AX9 1013 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 FER1L6-AS2Q96M78 137 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 RANBP9Q96S59 729 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 RUFY1Q96T51 708 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 TRIM55Q9BYV6 548 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 CHRNA10Q9GZZ6 450 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 KLHL25Q9H0H3 589 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 ETNK1Q9HBU6 452 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 SLAMF7Q9NQ25 335 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 RAB6BQ9NRW1 208 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 GPR83Q9NYM4 423 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 PAK5Q9P286 719 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 IFT80Q9P2H3 777 aaPredicted RBP13.26□□□□□ -0.29
GGA3-208ENST00000579743 ANKMY1Q9P2S6 941 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 ICKQ9UPZ9 632 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 PLAAQ9Y263 795 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 R3HDM2Q9Y2K5 976 aaKnown RBP13.26□□□□□ -0.29
GGA3-208ENST00000579743 TENM4Q6N022 2769 aa13.26□□□□□ -0.29
GGA3-208ENST00000579743 SLC5A10A0PJK1 596 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 LIASO43766 372 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 GOT2P00505 430 aaKnown RBP13.25□□□□□ -0.29
GGA3-208ENST00000579743 ALPPP05187 535 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 APRTP07741 180 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 PRSS56P0CW18 603 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 PVRP15151 417 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 ACADLP28330 430 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 CDC25BP30305 580 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 FOXN2P32314 431 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 FOLR3P41439 243 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 CD97P48960 835 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 TTPAP49638 278 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 SSPNQ14714 243 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 SLC5A12Q1EHB4 618 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 PTCHD3Q3KNS1 767 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 PRAMEF17Q5VTA0 474 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 MLIPQ5VWP3 458 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 CLEC1AQ8NC01 280 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 GALNT11Q8NCW6 608 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 CPT1CQ8TCG5 803 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 ATG4AQ8WYN0 398 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 VPS50Q96JG6 964 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 PANX3Q96QZ0 392 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 DESI2Q9BSY9 194 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 RAB11FIP5Q9BXF6 653 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 SLC29A3Q9BZD2 475 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.25□□□□□ -0.29
GGA3-208ENST00000579743 SLC39A10Q9ULF5 831 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 GUCA1BQ9UMX6 200 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 PLCL2Q9UPR0 1127 aa13.25□□□□□ -0.29
GGA3-208ENST00000579743 OR51F1A6NGY5 319 aa13.24□□□□□ -0.29
GGA3-208ENST00000579743 K7EM74 188 aa13.24□□□□□ -0.29
GGA3-208ENST00000579743 ZNF185O15231 689 aa13.24□□□□□ -0.29
GGA3-208ENST00000579743 ZSCAN9O15535 394 aaPredicted RBP13.24□□□□□ -0.29
GGA3-208ENST00000579743 RAB28P51157 221 aa13.24□□□□□ -0.29
GGA3-208ENST00000579743 ARSFP54793 590 aa13.24□□□□□ -0.29
GGA3-208ENST00000579743 HSPA14Q0VDF9 509 aa13.24□□□□□ -0.29
GGA3-208ENST00000579743 CHAF1BQ13112 559 aa13.24□□□□□ -0.29
GGA3-208ENST00000579743 RPS6KA1Q15418 735 aa13.24□□□□□ -0.29
GGA3-208ENST00000579743 ZC3H12BQ5HYM0 836 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms