RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 GBX1Q14549 363 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 KIR2DS5Q14953 304 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 PLCL1Q15111 1095 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 ISXQ2M1V0 245 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 KLHL38Q2WGJ6 581 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 KBTBD12Q3ZCT8 623 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 C3orf38Q5JPI3 329 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 PHF19Q5T6S3 580 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 HECTD2Q5U5R9 776 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 ZNF449Q6P9G9 518 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 ADGRD1Q6QNK2 874 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 WASH2PQ6VEQ5 465 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 RBM44Q6ZP01 1051 aaKnown RBP7.69□□□□□ -1.18
CCDC40-215ENST00000576033 SDCCAG8Q86SQ7 713 aaPredicted RBP7.69□□□□□ -1.18
CCDC40-215ENST00000576033 SLC9B2Q86UD5 537 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 TRABD2AQ86V40 505 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 CEP97Q8IW35 865 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 PALM2Q8IXS6 379 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 SLC22A15Q8IZD6 547 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 SPATA6LQ8N4H0 392 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 ZBTB2Q8N680 514 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 DCBLD1Q8N8Z6 715 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 HEXDCQ8WVB3 486 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 DCAKDQ8WVC6 231 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 NCSTNQ92542 709 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 TFGQ92734 400 aaPredicted RBP7.69□□□□□ -1.18
CCDC40-215ENST00000576033 GATA6Q92908 595 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 ELMO2Q96JJ3 720 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 TGM7Q96PF1 710 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 MCMBPQ9BTE3 642 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 MENTQ9BUN1 341 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 ABCG4Q9H172 646 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 WASH6PQ9NQA3 447 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 POT1Q9NUX5 634 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 SPHK1Q9NYA1 384 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 CTNNAL1Q9UBT7 734 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 ADAMTS6Q9UKP5 1117 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 SATB2Q9UPW6 733 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 KLHL20Q9Y2M5 609 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 MTO1Q9Y2Z2 717 aaKnown RBP7.69□□□□□ -1.18
CCDC40-215ENST00000576033 DNMT3AQ9Y6K1 912 aaPredicted RBP7.69□□□□□ -1.18
CCDC40-215ENST00000576033 SPENQ96T58 3664 aaKnown RBP7.69□□□□□ -1.18
CCDC40-215ENST00000576033 ACACBO00763 2458 aa7.69□□□□□ -1.18
CCDC40-215ENST00000576033 LOC400499M0QZD8 3231 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 DSPP15924 2871 aaKnown RBP7.68□□□□□ -1.18
CCDC40-215ENST00000576033 C17orf113A0A1B0GUU1 675 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 FAM95CA0A1B0GW59 222 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 TLDC2A0PJX2 215 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 OR6C74A6NCV1 312 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 LILRA5A6NI73 299 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ARHGEF33A8MVX0 844 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 FOXO6A8MYZ6 492 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 E5RI56 91 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 H3BMM5 538 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 BTN3A1O00481 513 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 LIN7AO14910 233 aaPredicted RBP7.68□□□□□ -1.18
CCDC40-215ENST00000576033 PHGDHO43175 533 aaKnown RBP7.68□□□□□ -1.18
CCDC40-215ENST00000576033 DUX1O43812 170 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 UBXN7O94888 489 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 TSPAN12O95859 305 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ESR1P03372 595 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 PROS1P07225 676 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 THRAP10827 490 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 CCL4P13236 92 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 JUPP14923 745 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 PVRP15151 417 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 POLR2CP19387 275 aaPredicted RBP7.68□□□□□ -1.18
CCDC40-215ENST00000576033 FDXRP22570 491 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 STX2P32856 288 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 LSP1P33241 339 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 CAPZBP47756 277 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 SEPHS1P49903 392 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ATP1A2P50993 1020 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 KPNA2P52292 529 aaKnown RBP7.68□□□□□ -1.18
CCDC40-215ENST00000576033 INHBCP55103 352 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 TAS2R39P59534 338 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 GNGT1P63211 74 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ILKQ13418 452 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 FASTKQ14296 549 aaKnown RBP7.68□□□□□ -1.18
CCDC40-215ENST00000576033 KCNAB1Q14722 419 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 RNF187Q5TA31 235 aaPredicted RBP7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ARMC3Q5W041 872 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 IRGCQ6NXR0 463 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 PAQR3Q6TCH7 311 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 C3orf62Q6ZUJ4 267 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 SH2D5Q6ZV89 423 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 OTOAQ7RTW8 1153 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ERMP1Q7Z2K6 904 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 CMC1Q7Z7K0 106 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ZC3HC1Q86WB0 502 aaKnown RBP7.68□□□□□ -1.18
CCDC40-215ENST00000576033 CTAGE3PQ8IX95 158 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 PPM1NQ8N819 430 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 LINC01555Q8NAE3 123 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 PPFIBP2Q8ND30 876 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 OR4E2Q8NGC2 313 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 DENND1AQ8TEH3 1009 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 EEF1AKMT1Q8WVE0 214 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 SKA2Q8WVK7 121 aaPredicted RBP7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ANKRD49Q8WVL7 239 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 SLC44A1Q8WWI5 657 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms