RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 TNRC6AQ8NDV7 1962 aaKnown RBP8.41□□□□□ -1.06
SMG6-216ENST00000575176 MED13Q9UHV7 2174 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 ARHGEF33A8MVX0 844 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 KLK10O43240 276 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 C1QL1O75973 258 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 C1orf105O95561 183 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 PKMP14618 531 aaKnown RBP8.4□□□□□ -1.06
SMG6-216ENST00000575176 PVRP15151 417 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 UGT2B7P16662 529 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 POLR2CP19387 275 aaPredicted RBP8.4□□□□□ -1.06
SMG6-216ENST00000575176 F8A1P23610 371 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 CD82P27701 267 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 NDUFS1P28331 727 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 PRDX3P30048 256 aaKnown RBP8.4□□□□□ -1.06
SMG6-216ENST00000575176 ECHS1P30084 290 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 CSTF2P33240 577 aaKnown RBP eCLIP8.4□□□□□ -1.06
SMG6-216ENST00000575176 ELK3P41970 407 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 BDKRB1P46663 353 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 SEPHS1P49903 392 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 PGGT1BP53609 377 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 CSE1LP55060 971 aaKnown RBP8.4□□□□□ -1.06
SMG6-216ENST00000575176 RAB15P59190 212 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 YBX1P67809 324 aaKnown RBP8.4□□□□□ -1.06
SMG6-216ENST00000575176 HSPA14Q0VDF9 509 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 PRKG2Q13237 762 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 PLCL1Q15111 1095 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 LONRF1Q17RB8 773 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 ZXDCQ2QGD7 858 aaPredicted RBP8.4□□□□□ -1.06
SMG6-216ENST00000575176 SOWAHCQ53LP3 525 aaPredicted RBP8.4□□□□□ -1.06
SMG6-216ENST00000575176 HSP90AA5PQ58FG0 334 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 DNAJC21Q5F1R6 531 aaKnown RBP8.4□□□□□ -1.06
SMG6-216ENST00000575176 ACSBG2Q5FVE4 666 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 PLEKHS1Q5SXH7 462 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 RBM20Q5T481 1227 aaKnown RBP8.4□□□□□ -1.06
SMG6-216ENST00000575176 RNF187Q5TA31 235 aaPredicted RBP8.4□□□□□ -1.06
SMG6-216ENST00000575176 CACHD1Q5VU97 1274 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 MRNIPQ6NTE8 343 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 IRGCQ6NXR0 463 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 CNSTQ6PJW8 725 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 UNC5DQ6UXZ4 953 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 CYHR1Q6ZMK1 362 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 GALNT7Q86SF2 657 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 TRIM73Q86UV7 250 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 KCNMB4Q86W47 210 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 OOSP2Q86WS3 158 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 FAM129CQ86XR2 697 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 LRRC56Q8IYG6 542 aaPredicted RBP8.4□□□□□ -1.06
SMG6-216ENST00000575176 SLC38A9Q8NBW4 561 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.4□□□□□ -1.06
SMG6-216ENST00000575176 OR4E2Q8NGC2 313 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 HMGCLL1Q8TB92 370 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 UBXN4Q92575 508 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 DLG3Q92796 817 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 KCNJ9Q92806 393 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 FAM136AQ96C01 138 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 CERS2Q96G23 380 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 SNF8Q96H20 258 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 C16orf45Q96MC5 204 aaPredicted RBP8.4□□□□□ -1.06
SMG6-216ENST00000575176 IL17FQ96PD4 163 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 TRAPPC9Q96Q05 1148 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 CHRNA10Q9GZZ6 450 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 AKIRIN1Q9H9L7 192 aaPredicted RBP8.4□□□□□ -1.06
SMG6-216ENST00000575176 FAM60AQ9NP50 221 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 HRASLS2Q9NWW9 162 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 SLC39A1Q9NY26 324 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 MOCS1Q9NZB8 636 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 CIDEBQ9UHD4 219 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 FBXO5Q9UKT4 447 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 IKZF3Q9UKT9 509 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 CHMP2BQ9UQN3 213 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 CRYL1Q9Y2S2 319 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 PCDHGA4Q9Y5G9 962 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 KLK4Q9Y5K2 254 aa8.4□□□□□ -1.06
SMG6-216ENST00000575176 FASNP49327 2511 aaKnown RBP8.4□□□□□ -1.07
SMG6-216ENST00000575176 PRRC2CQ9Y520 2896 aaKnown RBP8.39□□□□□ -1.07
SMG6-216ENST00000575176 LOC101059948A0A1B0GTJ6 334 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 UBA6A0AVT1 1052 aaPredicted RBP8.39□□□□□ -1.07
SMG6-216ENST00000575176 MAGEB16A2A368 324 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 STMND1H3BQB6 276 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 MYO1CO00159 1063 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 ZW10O43264 779 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 RAD1O60671 282 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 PSIP1O75475 530 aaKnown RBP8.39□□□□□ -1.07
SMG6-216ENST00000575176 STK17BO94768 372 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 HAUS5O94927 633 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 CAPN1P07384 714 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 CHRM5P08912 532 aaPredicted RBP8.39□□□□□ -1.07
SMG6-216ENST00000575176 ERVK-10P10266 1014 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 LIFP15018 202 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 AMD1P17707 334 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 PSMB5P28074 263 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 FMO4P31512 558 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 RORAP35398 523 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 STAT5AP42229 794 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 RAB28P51157 221 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 CDKN2DP55273 166 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 SARNPP82979 210 aaKnown RBP8.39□□□□□ -1.07
SMG6-216ENST00000575176 BIRC2Q13490 618 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 CUL1Q13616 776 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 MAP7Q14244 749 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms