RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 ASB11Q8WXH4 323 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 AHCYL2Q96HN2 611 aaKnown RBP13.2□□□□□ -0.3
NDE1-209ENST00000574109 UBXN10Q96LJ8 280 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 FERD3LQ96RJ6 166 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 CCDC3Q9BQI4 270 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 ZMYND15Q9H091 742 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 STMN4Q9H169 189 aaPredicted RBP13.2□□□□□ -0.3
NDE1-209ENST00000574109 CAB39LQ9H9S4 337 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 NMRAL1Q9HBL8 299 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 DLL3Q9NYJ7 618 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 EURLQ9NYK6 297 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 OR6C2Q9NZP2 312 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 SENP1Q9P0U3 644 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 GALPQ9UBC7 116 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 CFAP20Q9Y6A4 193 aaKnown RBP13.2□□□□□ -0.3
NDE1-209ENST00000574109 COL27A1Q8IZC6 1860 aaPredicted RBP13.2□□□□□ -0.3
NDE1-209ENST00000574109 SNRNP200O75643 2136 aaKnown RBP13.19□□□□□ -0.3
NDE1-209ENST00000574109 A0A096LPK6 155 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 HMX2A2RU54 273 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 CPED1A4D0V7 1026 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 GOLGA6L10A6NI86 522 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 MYO1CO00159 1063 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 PHGDHO43175 533 aaKnown RBP13.19□□□□□ -0.3
NDE1-209ENST00000574109 HIST1H2AGP0C0S8 130 aaPredicted RBP13.19□□□□□ -0.3
NDE1-209ENST00000574109 CCDC166P0CW27 439 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 KRT15P19012 456 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 HIST1H2ADP20671 130 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 HOXD11P31277 338 aaPredicted RBP13.19□□□□□ -0.3
NDE1-209ENST00000574109 RAB28P51157 221 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 CDKL1Q00532 357 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 SQSTM1Q13501 440 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 ZNF460Q14592 562 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 PUM1Q14671 1186 aaKnown RBP eCLIP13.19□□□□□ -0.34e-6■□□□□ 8.5
NDE1-209ENST00000574109 KRT71Q3SY84 523 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 DUS1LQ6P1R4 473 aaKnown RBP13.19□□□□□ -0.3
NDE1-209ENST00000574109 FRA10AC1Q70Z53 315 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 UBE2R2Q712K3 238 aaPredicted RBP13.19□□□□□ -0.3
NDE1-209ENST00000574109 PIWIL4Q7Z3Z4 852 aaKnown RBP13.19□□□□□ -0.3
NDE1-209ENST00000574109 CMC1Q7Z7K0 106 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 RASGRP3Q8IV61 690 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 CARFQ8N187 725 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 OR52E1Q8NGJ3 308 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 OR5AR1Q8NGP9 310 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 EPS8L3Q8TE67 593 aaKnown RBP13.19□□□□□ -0.3
NDE1-209ENST00000574109 LCN9Q8WX39 176 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 ATL1Q8WXF7 558 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 HIST1H2AHQ96KK5 128 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 CAMK1GQ96NX5 476 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 HIST1H2AJQ99878 128 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 H2AFJQ9BTM1 129 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 SLC12A9Q9BXP2 914 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 RAB33BQ9H082 229 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 RDH14Q9HBH5 336 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 PARVBQ9HBI1 364 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 CTNNAL1Q9UBT7 734 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 ENTPD2Q9Y5L3 495 aa13.19□□□□□ -0.3
NDE1-209ENST00000574109 MN1Q10571 1320 aaPredicted RBP13.18□□□□□ -0.3
NDE1-209ENST00000574109 PTPRBP23467 1997 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 IGHV1OR21-1A0A087WYE8 117 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 SYCE1LA8MT33 242 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 ARHGEF33A8MVX0 844 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 BTN3A1O00481 513 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 PPM1DO15297 605 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 UBXN7O94888 489 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 DKK1O94907 266 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 KLHL2O95198 593 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 FKBP9O95302 570 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 CPNE6O95741 557 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 C2P06681 752 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 GSTA1P08263 222 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 MYZAPP0CAP1 466 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 PKLRP30613 574 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 ABRQ12979 859 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 PRKAA1Q13131 559 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 SPIDRQ14159 915 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 NAA25Q14CX7 972 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 CDKL4Q5MAI5 379 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 ANKS6Q68DC2 871 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 WDR74Q6RFH5 385 aaPredicted RBP13.18□□□□□ -0.3
NDE1-209ENST00000574109 PLXDC1Q8IUK5 500 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 CFAP61Q8NHU2 1237 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 RHEBL1Q8TAI7 183 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 HMGCLL1Q8TB92 370 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 SLC22A18Q96BI1 424 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 GRAMD1AQ96CP6 724 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 CD180Q99467 661 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 ABCG4Q9H172 646 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 SRMSQ9H3Y6 488 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 LNPEPQ9UIQ6 1025 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 OARD1Q9Y530 152 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 NFS1Q9Y697 457 aa13.18□□□□□ -0.3
NDE1-209ENST00000574109 ADAMTS20P59510 1910 aa13.17□□□□□ -0.3
NDE1-209ENST00000574109 TRBV23OR9-2A0A075B6M9 112 aa13.17□□□□□ -0.3
NDE1-209ENST00000574109 UQCRHLA0A096LP55 91 aa13.17□□□□□ -0.3
NDE1-209ENST00000574109 SMIM23A6NLE4 172 aa13.17□□□□□ -0.3
NDE1-209ENST00000574109 D6RAR5 112 aa13.17□□□□□ -0.3
NDE1-209ENST00000574109 KCNK5O95279 499 aa13.17□□□□□ -0.3
NDE1-209ENST00000574109 MT-ND3P03897 115 aa13.17□□□□□ -0.3
NDE1-209ENST00000574109 PROS1P07225 676 aa13.17□□□□□ -0.3
NDE1-209ENST00000574109 UQCRHP07919 91 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms