RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 AOAHP28039 575 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 NPY2RP49146 381 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 PLOD1Q02809 727 aaPredicted RBP16.86■□□□□ 0.29
SMG6-214ENST00000573827 FASTKD1Q53R41 847 aaKnown RBP16.86■□□□□ 0.29
SMG6-214ENST00000573827 TMTC4Q5T4D3 741 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 C16orf46Q6P387 395 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 LRRC8BQ6P9F7 803 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 CDHR3Q6ZTQ4 885 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 TRIM73Q86UV7 250 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 APOBEC4Q8WW27 367 aaKnown RBP16.86■□□□□ 0.29
SMG6-214ENST00000573827 CHRNA10Q9GZZ6 450 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 KLHL25Q9H0H3 589 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 MRM3Q9HC36 420 aaKnown RBP16.86■□□□□ 0.29
SMG6-214ENST00000573827 FAM60AQ9NP50 221 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 CATSPERZQ9NTU4 200 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 SOHLH2Q9NX45 425 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 SYBUQ9NX95 663 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 TTC7AQ9ULT0 858 aaPredicted RBP16.86■□□□□ 0.29
SMG6-214ENST00000573827 PYCARD-AS1I3L0S3 204 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 PRMT5O14744 637 aaPredicted RBP16.85■□□□□ 0.29
SMG6-214ENST00000573827 CD3EAPO15446 510 aaKnown RBP16.85■□□□□ 0.29
SMG6-214ENST00000573827 SLC28A2O43868 658 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 SLCO2B1O94956 709 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 ZIC2O95409 532 aaPredicted RBP16.85■□□□□ 0.29
SMG6-214ENST00000573827 CHRM5P08912 532 aaPredicted RBP16.85■□□□□ 0.29
SMG6-214ENST00000573827 MGAT1P26572 445 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 SHMT2P34897 504 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 PRAMEP78395 509 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 BASP1P80723 227 aaKnown RBP16.85■□□□□ 0.29
SMG6-214ENST00000573827 CDK16Q00536 496 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 ERV3-1Q14264 604 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 DNAJC21Q5F1R6 531 aaKnown RBP16.85■□□□□ 0.29
SMG6-214ENST00000573827 ANKRD22Q5VYY1 191 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 ZNF385CQ66K41 422 aaPredicted RBP16.85■□□□□ 0.29
SMG6-214ENST00000573827 ZNF449Q6P9G9 518 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 CAND1Q86VP6 1230 aaKnown RBP16.85■□□□□ 0.29
SMG6-214ENST00000573827 REXO1L1PQ8IX06 675 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 KRT222Q8N1A0 295 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 LINC01555Q8NAE3 123 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 MFSD3Q96ES6 412 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 MS4A14Q96JA4 679 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 GPR87Q9BY21 358 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 ACTL8Q9H568 366 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 SYTL2Q9HCH5 934 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 HOMER3Q9NSC5 361 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 PCMTD2Q9NV79 361 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 OR6C2Q9NZP2 312 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 POLG2Q9UHN1 485 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 PLAGL1Q9UM63 463 aa16.85■□□□□ 0.29
SMG6-214ENST00000573827 PIPSLA2A3N6 862 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 KATNA1O75449 491 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 TMEM63AO94886 807 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 CTSBP07858 339 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 RPS3P23396 243 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMG6-214ENST00000573827 PTPN4P29074 926 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 PKLRP30613 574 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 RPS18P62269 152 aaKnown RBP16.84■□□□□ 0.29
SMG6-214ENST00000573827 IL10RAQ13651 578 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 TRIP13Q15645 432 aaPredicted RBP16.84■□□□□ 0.29
SMG6-214ENST00000573827 CYP1B1Q16678 543 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 KYNUQ16719 465 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 AARS2Q5JTZ9 985 aaKnown RBP16.84■□□□□ 0.29
SMG6-214ENST00000573827 CTSL3PQ5NE16 218 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 IZUMO3Q5VZ72 239 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 FAM198BQ6UWH4 519 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 CES3Q6UWW8 571 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 TMEM126BQ8IUX1 230 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 DSELQ8IZU8 1212 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 MPP5Q8N3R9 675 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 ABHD17AQ96GS6 310 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 BIRC8Q96P09 236 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 CHST8Q9H2A9 424 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 BFARQ9NZS9 450 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 SOX13Q9UN79 622 aa16.84■□□□□ 0.29
SMG6-214ENST00000573827 TMEM150CB9EJG8 249 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 K7EM74 188 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 MEN1O00255 615 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 AVILO75366 819 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 TTPAP49638 278 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 CSE1LP55060 971 aaKnown RBP16.83■□□□□ 0.28
SMG6-214ENST00000573827 HSPA14Q0VDF9 509 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 SPTAN1Q13813 2472 aaKnown RBP16.83■□□□□ 0.28
SMG6-214ENST00000573827 GBX1Q14549 363 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 TYSND1Q2T9J0 566 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 SYTL3Q4VX76 610 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 GSTA5Q7RTV2 222 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 AGGF1Q8N302 714 aaeCLIP16.83■□□□□ 0.282e-11■■■■□ 26.1
SMG6-214ENST00000573827 C19orf47Q8N9M1 422 aaKnown RBP16.83■□□□□ 0.28
SMG6-214ENST00000573827 LMNTD1Q8N9Z9 388 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 ADAMTS17Q8TE56 1095 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 ASZ1Q8WWH4 475 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 CPT1BQ92523 772 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 LPGAT1Q92604 370 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 TTC1Q99614 292 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 TRIM56Q9BRZ2 755 aaKnown RBP16.83■□□□□ 0.28
SMG6-214ENST00000573827 FAM117AQ9C073 453 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 JRKLQ9Y4A0 524 aa16.83■□□□□ 0.28
SMG6-214ENST00000573827 USP9YO00507 2555 aaPredicted RBP16.83■□□□□ 0.28
SMG6-214ENST00000573827 PCSK5Q92824 1860 aa16.82■□□□□ 0.28
SMG6-214ENST00000573827 CDC14CA4D256 554 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms