RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 CPT1BQ92523 772 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 PCSK5Q92824 1860 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 MIB2Q96AX9 1013 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 RANBP9Q96S59 729 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 NLNQ9BYT8 704 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 RAB6BQ9NRW1 208 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 MED13Q9UHV7 2174 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 TCFL5Q9UL49 500 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 RIMKLBQ9ULI2 386 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 ASF1AQ9Y294 204 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 ARGFXA6NJG6 315 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 ERI2A8K979 691 aaKnown RBP17.5■□□□□ 0.39
CHD3-214ENST00000572579 ZNF749O43361 778 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 KLK3P07288 261 aaPredicted RBP17.5■□□□□ 0.39
CHD3-214ENST00000572579 RAB40ALP0C0E4 278 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 ADRA1DP25100 572 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 FDFT1P37268 417 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 PTGIRP43119 386 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 CSE1LP55060 971 aaKnown RBP17.5■□□□□ 0.39
CHD3-214ENST00000572579 FOXL2P58012 376 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 GRB7Q14451 532 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 DEFB110Q30KQ9 67 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 MEI1Q5TIA1 1274 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 SYTL1Q8IYJ3 562 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 TBC1D21Q8IYX1 336 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 LRRC45Q96CN5 670 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 ING2Q9H160 280 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 ACTR5Q9H9F9 607 aaPredicted RBP17.5■□□□□ 0.39
CHD3-214ENST00000572579 CHRAC1Q9NRG0 131 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 ZNF148Q9UQR1 794 aa17.5■□□□□ 0.39
CHD3-214ENST00000572579 MAST4O15021 2626 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 HEATR9A2RTY3 570 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 GPC4O75487 556 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 KLF7O75840 302 aaPredicted RBP17.49■□□□□ 0.39
CHD3-214ENST00000572579 CEACAM4O75871 244 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 CBSLP0DN79 551 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 CBSP35520 551 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 CCL11P51671 97 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 GSDMDP57764 484 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 CRADDP78560 199 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 KRT222Q8N1A0 295 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 DNAJC22Q8N4W6 341 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 C19orf47Q8N9M1 422 aaKnown RBP17.49■□□□□ 0.39
CHD3-214ENST00000572579 LINC01555Q8NAE3 123 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 OR4L1Q8NH43 312 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 OR5K2Q8NHB8 316 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 CLIP3Q96DZ5 547 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 SGSM3Q96HU1 749 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 ALS2CR12Q96Q35 445 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 SYTL2Q9HCH5 934 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 CIDEBQ9UHD4 219 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 SERTAD3Q9UJW9 196 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 KLHL20Q9Y2M5 609 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 TDRKHQ9Y2W6 561 aaKnown RBP17.49■□□□□ 0.39
CHD3-214ENST00000572579 TCAF1Q9Y4C2 921 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 LRRK2Q5S007 2527 aa17.49■□□□□ 0.39
CHD3-214ENST00000572579 CNOT3O75175 753 aaKnown RBP17.48■□□□□ 0.39
CHD3-214ENST00000572579 FTH1P02794 183 aa17.48■□□□□ 0.39
CHD3-214ENST00000572579 APRTP07741 180 aa17.48■□□□□ 0.39
CHD3-214ENST00000572579 CYP2A7P20853 494 aa17.48■□□□□ 0.39
CHD3-214ENST00000572579 ARNTP27540 789 aa17.48■□□□□ 0.39
CHD3-214ENST00000572579 NADK2Q4G0N4 442 aa17.48■□□□□ 0.39
CHD3-214ENST00000572579 PAPD7Q5XG87 772 aaKnown RBP17.48■□□□□ 0.39
CHD3-214ENST00000572579 AFTPHQ6ULP2 937 aa17.48■□□□□ 0.39
CHD3-214ENST00000572579 PPP1R21Q6ZMI0 780 aa17.48■□□□□ 0.39
CHD3-214ENST00000572579 TEX19Q8NA77 164 aa17.48■□□□□ 0.39
CHD3-214ENST00000572579 OR6P1Q8NGX9 317 aa17.48■□□□□ 0.39
CHD3-214ENST00000572579 AP1M1Q9BXS5 423 aa17.48■□□□□ 0.39
CHD3-214ENST00000572579 FRMD8P1Q9BZ68 369 aaPredicted RBP17.48■□□□□ 0.39
CHD3-214ENST00000572579 CHRNA10Q9GZZ6 450 aa17.48■□□□□ 0.39
CHD3-214ENST00000572579 TREX1Q9NSU2 369 aa17.48■□□□□ 0.39
CHD3-214ENST00000572579 OR6C2Q9NZP2 312 aa17.48■□□□□ 0.39
CHD3-214ENST00000572579 E7EQ34 232 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 OR56A5P0C7T3 313 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 SHMT2P34897 504 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 KCNJ1P48048 391 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 CD97P48960 835 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 NCF4Q15080 339 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 SEL1L2Q5TEA6 688 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 ZNF449Q6P9G9 518 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 SPNS2Q8IVW8 549 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 SLC22A15Q8IZD6 547 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 C2orf73Q8N5S3 287 aaPredicted RBP17.47■□□□□ 0.39
CHD3-214ENST00000572579 TCTN2Q96GX1 697 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 IL17FQ96PD4 163 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 GBP5Q96PP8 586 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 FANCEQ9HB96 536 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 SLC22A11Q9NSA0 550 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 POLG2Q9UHN1 485 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 SNX7Q9UNH6 387 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 DOPEY2Q9Y3R5 2298 aa17.47■□□□□ 0.39
CHD3-214ENST00000572579 USP9XQ93008 2570 aaPredicted RBP17.46■□□□□ 0.39
CHD3-214ENST00000572579 PIKFYVEQ9Y2I7 2098 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 NBPF19A0A087WUL8 3843 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 TCRBV7S3A2A0A539 114 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 KRT87PA6NCN2 255 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 MASP2O00187 686 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 ITGAXP20702 1163 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 AOAHP28039 575 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 NMBRP28336 390 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms