RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 CEP128Q6ZU80 1094 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 ZC3HC1Q86WB0 502 aaKnown RBP17.6■□□□□ 0.41
PFN1-202ENST00000572383 RELL1Q8IUW5 271 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 LCN9Q8WX39 176 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 INPP5DQ92835 1189 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 LIN37Q96GY3 246 aaPredicted RBP17.6■□□□□ 0.41
PFN1-202ENST00000572383 ZNF578Q96N58 590 aaPredicted RBP17.6■□□□□ 0.41
PFN1-202ENST00000572383 DCBLD2Q96PD2 775 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 TGM7Q96PF1 710 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 STRADBQ9C0K7 418 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 TSPYL1Q9H0U9 437 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 CDC42EP4Q9H3Q1 356 aaKnown RBP17.6■□□□□ 0.41
PFN1-202ENST00000572383 TFB2MQ9H5Q4 396 aaKnown RBP17.6■□□□□ 0.41
PFN1-202ENST00000572383 XKR8Q9H6D3 395 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 HRASLS2Q9NWW9 162 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 NSMCE4AQ9NXX6 385 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 PDP2Q9P2J9 529 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 KLHL42Q9P2K6 505 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 CORO1CQ9ULV4 474 aaPredicted RBP17.6■□□□□ 0.41
PFN1-202ENST00000572383 PLAGL1Q9UM63 463 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 SATB2Q9UPW6 733 aa17.6■□□□□ 0.41
PFN1-202ENST00000572383 MN1Q10571 1320 aaPredicted RBP17.59■□□□□ 0.41
PFN1-202ENST00000572383 OR5K3A6NET4 321 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 A8MU76 341 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 SPAG6O75602 509 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 C9P02748 559 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 STX2P32856 288 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 PGGT1BP53609 377 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 ERVPABLB-1P60509 514 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 C16orf72Q14CZ0 275 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 KBTBD12Q3ZCT8 623 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 IRGCQ6NXR0 463 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 PLXDC1Q8IUK5 500 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 CTAGE3PQ8IX95 158 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 CPNE9Q8IYJ1 553 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 CRELD1Q96HD1 420 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 OLFM1Q99784 485 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 MCMBPQ9BTE3 642 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 SRMSQ9H3Y6 488 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 TAS2R13Q9NYV9 303 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 CIDEBQ9UHD4 219 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 POLG2Q9UHN1 485 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 TRMT6Q9UJA5 497 aaKnown RBP17.59■□□□□ 0.41
PFN1-202ENST00000572383 ICKQ9UPZ9 632 aa17.59■□□□□ 0.41
PFN1-202ENST00000572383 CCDC187A0A096LP49 1063 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 MATN4O95460 622 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 C1orf105O95561 183 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 HGFP14210 728 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 POLR2CP19387 275 aaPredicted RBP17.58■□□□□ 0.4
PFN1-202ENST00000572383 FDXRP22570 491 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 MCM3P25205 808 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 BDKRB1P46663 353 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 TRA2AQ13595 282 aaKnown RBP eCLIP17.58■□□□□ 0.4
PFN1-202ENST00000572383 EFTUD2Q15029 972 aaKnown RBP eCLIP17.58■□□□□ 0.41e-10■■■■□ 21.7
PFN1-202ENST00000572383 FAM45BPQ6NSW5 357 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 UGT3A1Q6NUS8 523 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 KLHL35Q6PF15 583 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 FOXR1Q6PIV2 292 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 PAQR3Q6TCH7 311 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 FAM92BQ6ZTR7 304 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 RAB11FIP2Q7L804 512 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 AMIGO1Q86WK6 493 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 OOSP2Q86WS3 158 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 DCUN1D3Q8IWE4 304 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 PPM1NQ8N819 430 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 FAM45AQ8TCE6 357 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 ELMO2Q96JJ3 720 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 RAB33BQ9H082 229 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 EPHA6Q9UF33 1036 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 VWA7Q9Y334 891 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 PCDHGA8Q9Y5G5 932 aa17.58■□□□□ 0.4
PFN1-202ENST00000572383 FAM95CA0A1B0GW59 222 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 KRT87PA6NCN2 255 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 BTN3A3O00478 584 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 BTN3A1O00481 513 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 KIF1CO43896 1103 aaKnown RBP17.57■□□□□ 0.4
PFN1-202ENST00000572383 RPN2P04844 631 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 SAT1P21673 171 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 CD9P21926 228 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 SKIV2L2P42285 1042 aaKnown RBP17.57■□□□□ 0.4
PFN1-202ENST00000572383 MLLT3P42568 568 aaPredicted RBP17.57■□□□□ 0.4
PFN1-202ENST00000572383 PCBP4P57723 403 aaKnown RBP17.57■□□□□ 0.4
PFN1-202ENST00000572383 GRB7Q14451 532 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 CCSMST1Q4G0I0 132 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 GSPT2Q8IYD1 628 aaKnown RBP17.57■□□□□ 0.4
PFN1-202ENST00000572383 WDR36Q8NI36 951 aaKnown RBP17.57■□□□□ 0.4
PFN1-202ENST00000572383 EEF1AKMT1Q8WVE0 214 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 ZDHHC12Q96GR4 267 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 FOPNLQ96NB1 174 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 CPNE1Q99829 537 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 RHOJQ9H4E5 214 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 ASCL3Q9NQ33 180 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 THSD1Q9NS62 852 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 TXNDC16Q9P2K2 825 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 LOXL2Q9Y4K0 774 aa17.57■□□□□ 0.4
PFN1-202ENST00000572383 FAM155BO75949 473 aa17.56■□□□□ 0.4
PFN1-202ENST00000572383 SLU7O95391 586 aaKnown RBP17.56■□□□□ 0.4
PFN1-202ENST00000572383 ACSL3O95573 720 aa17.56■□□□□ 0.4
PFN1-202ENST00000572383 FAM153BP0C7A2 387 aa17.56■□□□□ 0.4
PFN1-202ENST00000572383 MPC1LP0DKB6 136 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms