RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 PNLIPP16233 465 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 MSH3P20585 1137 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 SERPINB8P50452 374 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 CLCN7P51798 805 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 PGGT1BP53609 377 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 FOXK1P85037 733 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 ZFP36L1Q07352 338 aaKnown RBP13.44□□□□□ -0.26
RPAIN-209ENST00000571558 USP10Q14694 798 aaKnown RBP13.44□□□□□ -0.26
RPAIN-209ENST00000571558 ZNF658BQ4V348 819 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-209ENST00000571558 BCL7AQ4VC05 210 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 BORAQ6PGQ7 559 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 DET1Q7L5Y6 550 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 CMC1Q7Z7K0 106 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 PIM3Q86V86 326 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 ZNF547Q8IVP9 402 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 SPNS2Q8IVW8 549 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 LKAAEAR1Q8TD35 194 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 CCDC74AQ96AQ1 378 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 DCUN1D1Q96GG9 259 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 SCARF2Q96GP6 870 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-209ENST00000571558 ATP6V1G3Q96LB4 118 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 ZCCHC2Q9C0B9 1178 aaKnown RBP13.44□□□□□ -0.26
RPAIN-209ENST00000571558 CENPHQ9H3R5 247 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 LRRN3Q9H3W5 708 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 SNX15Q9NRS6 342 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 GULP1Q9UBP9 304 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 PISDQ9UG56 409 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 TMEM98Q9Y2Y6 226 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 LOXL2Q9Y4K0 774 aa13.44□□□□□ -0.26
RPAIN-209ENST00000571558 PCYT1BQ9Y5K3 369 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-209ENST00000571558 SPTAN1Q13813 2472 aaKnown RBP13.44□□□□□ -0.26
RPAIN-209ENST00000571558 A0A1W2PQM1 296 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 GPR89AB7ZAQ6 455 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 DNAJC6O75061 913 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 CDK14O94921 469 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 MT-ND3P03897 115 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 RPLP0P05388 317 aaKnown RBP13.43□□□□□ -0.26
RPAIN-209ENST00000571558 GPR89BP0CG08 455 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 SLC35E2BP0CK96 405 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 ZNF8P17098 575 aaPredicted RBP13.43□□□□□ -0.26
RPAIN-209ENST00000571558 KRT15P19012 456 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 CCNFP41002 786 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 CASRP41180 1078 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 PRLHRP49683 370 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 HK3P52790 923 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 RAB10P61026 200 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 CCL7P80098 99 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 NFATC4Q14934 902 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 KCTD16Q68DU8 428 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 PTRHD1Q6GMV3 140 aaKnown RBP13.43□□□□□ -0.26
RPAIN-209ENST00000571558 TMEM207Q6UWW9 146 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 EXOC3L1Q86VI1 746 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 GKN2Q86XP6 184 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 KRT222Q8N1A0 295 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 GIMAP7Q8NHV1 300 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 SLC30A3Q99726 388 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 TCEAL2Q9H3H9 227 aaPredicted RBP13.43□□□□□ -0.26
RPAIN-209ENST00000571558 POPDC3Q9HBV1 291 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 LATS2Q9NRM7 1088 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 GPR34Q9UPC5 381 aa13.43□□□□□ -0.26
RPAIN-209ENST00000571558 PRAMEF33A0A0G2JMD5 474 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 OR2AG2A6NM03 316 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 H3BQF6 201 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 CACNB4O00305 520 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-209ENST00000571558 NUAK1O60285 661 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 PRAMEF10O60809 474 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 C2P06681 752 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 OR56A5P0C7T3 313 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 CTSEP14091 401 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 HGFP14210 728 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 CREB1P16220 341 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 GLB1P16278 677 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 STMN1P16949 149 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 CRABP2P29373 138 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 SRSF6Q13247 344 aaKnown RBP13.42□□□□□ -0.26
RPAIN-209ENST00000571558 ZNF460Q14592 562 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 CLCA4Q14CN2 919 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 TMEM220Q6QAJ8 160 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 C11orf96Q7Z7L8 435 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 SRRM1Q8IYB3 904 aaKnown RBP13.42□□□□□ -0.26
RPAIN-209ENST00000571558 FAM26EQ8N5C1 309 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 SPDYE1Q8NFV5 336 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-209ENST00000571558 CD200R1Q8TD46 325 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 ACMSDQ8TDX5 336 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 ZNF514Q96K75 400 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-209ENST00000571558 UBXN10Q96LJ8 280 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 LINC00615Q96LM1 132 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-209ENST00000571558 PSMG3-AS1Q96PY0 264 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 GPR21Q99679 349 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 STMN4Q9H169 189 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-209ENST00000571558 EPN3Q9H201 632 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 CCDC68Q9H2F9 335 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 FGF22Q9HCT0 170 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 MED4Q9NPJ6 270 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 FAM53CQ9NYF3 392 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 TAS2R13Q9NYV9 303 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 AKAP7Q9P0M2 348 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-209ENST00000571558 SENP1Q9P0U3 644 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 KLHL42Q9P2K6 505 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 PNMA8BQ9ULN7 279 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms