RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 MIPP30301 263 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 CPOXP36551 454 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 MARCKSL1P49006 195 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 LMAN1P49257 510 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 SULT1E1P49888 294 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 TPTEP56180 551 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 TAS2R40P59535 323 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 YWHAGP61981 247 aaKnown RBP eCLIP7.08□□□□□ -1.28
CNOT1-222ENST00000570139 OLR1P78380 273 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 PLIN5Q00G26 463 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 DEUP1Q05D60 604 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 C2orf54Q08AI8 447 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 CCDC15Q0P6D6 951 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 CUL1Q13616 776 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 KRT81Q14533 505 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 VEPH1Q14D04 833 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 DPYSL2Q16555 572 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 ERCC6LQ2NKX8 1250 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 DCAF6Q58WW2 860 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 BRMS1LQ5PSV4 323 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 ERMARDQ5T6L9 678 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 DENND5BQ6ZUT9 1274 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 BZW1Q7L1Q6 419 aaKnown RBP7.08□□□□□ -1.28
CNOT1-222ENST00000570139 MAVSQ7Z434 540 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 MTERF4Q7Z6M4 381 aaKnown RBP7.08□□□□□ -1.28
CNOT1-222ENST00000570139 GALNT7Q86SF2 657 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 PHLDB2Q86SQ0 1253 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 IFT20Q8IY31 132 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 DEFB106AQ8N104 65 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 ZNF276Q8N554 614 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 SIRT6Q8N6T7 355 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 KCTD6Q8NC69 237 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 TOR1AIP2Q8NFQ8 470 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 ZNF461Q8TAF7 563 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 INTS12Q96CB8 462 aaKnown RBP7.08□□□□□ -1.28
CNOT1-222ENST00000570139 CTHRC1Q96CG8 243 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 MS4A14Q96JA4 679 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 CFAP57Q96MR6 1250 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 SERPINB11Q96P15 392 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 KCNK16Q96T55 309 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 TEX12Q9BXU0 123 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 TRIM31Q9BZY9 425 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 LRRC19Q9H756 370 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 SLC35C2Q9NQQ7 365 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 SLC22A11Q9NSA0 550 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.08□□□□□ -1.28
CNOT1-222ENST00000570139 IL37Q9NZH6 218 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 IL1RAPL1Q9NZN1 696 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 MRPL15Q9P015 296 aaKnown RBP7.08□□□□□ -1.28
CNOT1-222ENST00000570139 SLC25A13Q9UJS0 675 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 ZFR2Q9UPR6 939 aaKnown RBP7.08□□□□□ -1.28
CNOT1-222ENST00000570139 UTP11Q9Y3A2 253 aaKnown RBP7.08□□□□□ -1.28
CNOT1-222ENST00000570139 hCG_1818297A0A087WSY0 165 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 A0A1W2PQ09 198 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 LRRD1A4D1F6 860 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 MARCH11A6NNE9 402 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 YJEFN3A6XGL0 299 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 E7ENQ6 273 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 C5orf67F2Z3F1 127 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 APOC4-APOC2K7ER74 178 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 RNASET2O00584 256 aaKnown RBP7.07□□□□□ -1.28
CNOT1-222ENST00000570139 CLGNO14967 610 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 LPXNO60711 386 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 GRAP2O75791 330 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 NXPH3O95157 252 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 APOC2P02655 101 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 FESP07332 822 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 CTSAP10619 480 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 RALAP11233 206 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 ARSAP15289 507 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 SAT1P21673 171 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 TGM2P21980 687 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 KDELR1P24390 212 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 YWHAQP27348 245 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 DUSP1P28562 367 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 GJC1P36383 396 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 CDKN2BP42772 138 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 NR2C2P49116 596 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 HDAC4P56524 1084 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 LINC00310P59036 64 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 DR1Q01658 176 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 TMEM115Q12893 351 aaPredicted RBP7.07□□□□□ -1.28
CNOT1-222ENST00000570139 BYSLQ13895 437 aaKnown RBP7.07□□□□□ -1.28
CNOT1-222ENST00000570139 CDO1Q16878 200 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 C15orf59Q2T9L4 293 aaPredicted RBP7.07□□□□□ -1.28
CNOT1-222ENST00000570139 BSPRYQ5W0U4 402 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 TCTN3Q6NUS6 607 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 TMEM81Q6P7N7 255 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 KLHL35Q6PF15 583 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 CCDC137Q6PK04 289 aaKnown RBP7.07□□□□□ -1.28
CNOT1-222ENST00000570139 PTCHD4Q6ZW05 846 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 GALNTL5Q7Z4T8 443 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 ITIH5Q86UX2 942 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 TMEM173Q86WV6 379 aaPredicted RBP7.07□□□□□ -1.28
CNOT1-222ENST00000570139 SCN4BQ8IWT1 228 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 NOA1Q8NC60 698 aaKnown RBP7.07□□□□□ -1.28
CNOT1-222ENST00000570139 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.07□□□□□ -1.28
CNOT1-222ENST00000570139 RNF139Q8WU17 664 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 ANKRD7Q92527 254 aa7.07□□□□□ -1.28
CNOT1-222ENST00000570139 FKBP10Q96AY3 582 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms