RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 TCEA2Q15560 299 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 CLPPQ16740 277 aaPredicted RBP22.84■■□□□ 1.25
RAB40C-212ENST00000569575 KLHL35Q6PF15 583 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 TMEM26Q6ZUK4 368 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 ISCA2Q86U28 154 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 NAXDQ8IW45 347 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 SETD7Q8WTS6 366 aaKnown RBP22.84■■□□□ 1.25
RAB40C-212ENST00000569575 ATL1Q8WXF7 558 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 CCDC138Q96M89 665 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 SH3GL2Q99962 352 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 MRPL57Q9BQC6 102 aaKnown RBP22.84■■□□□ 1.25
RAB40C-212ENST00000569575 RXFP3Q9NSD7 469 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 SPATA7Q9P0W8 599 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 LNPEPQ9UIQ6 1025 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 OARD1Q9Y530 152 aa22.84■■□□□ 1.25
RAB40C-212ENST00000569575 RHPN2P1A8MT19 583 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 AGPSO00116 658 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 MYO1CO00159 1063 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 BTN3A1O00481 513 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 COPEO14579 308 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 GP1BAP07359 652 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 CDK4P11802 303 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 CKMT2P17540 419 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 HNMTP50135 292 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 SRRM1Q8IYB3 904 aaKnown RBP22.83■■□□□ 1.25
RAB40C-212ENST00000569575 KYQ8NBH2 561 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 CFAP61Q8NHU2 1237 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 KCTD4Q8WVF5 259 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 NXNL1Q96CM4 212 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 CAMK1GQ96NX5 476 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 GPR78Q96P69 363 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 CENPHQ9H3R5 247 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 PCMTD2Q9NV79 361 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 FTSJ1Q9UET6 329 aa22.83■■□□□ 1.25
RAB40C-212ENST00000569575 GOLGA4Q13439 2230 aaKnown RBP22.82■■□□□ 1.24
RAB40C-212ENST00000569575 ASCC3Q8N3C0 2202 aaKnown RBP22.82■■□□□ 1.24
RAB40C-212ENST00000569575 KERAO60938 352 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 TFEBP19484 476 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 SHMT2P34897 504 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 GPS2Q13227 327 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 ILKQ13418 452 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 CCDC153Q494R4 210 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 SBSNQ6UWP8 590 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 TCAIMQ8N3R3 496 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 OR9A1PQ8NGU1 263 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 WDR48Q8TAF3 677 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 HMGCLL1Q8TB92 370 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 BAHD1Q8TBE0 780 aaPredicted RBP22.82■■□□□ 1.24
RAB40C-212ENST00000569575 IQCGQ9H095 443 aaKnown RBP22.82■■□□□ 1.24
RAB40C-212ENST00000569575 SLC32A1Q9H598 525 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 OR6C2Q9NZP2 312 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 SIRPGQ9P1W8 387 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 LRIT1Q9P2V4 623 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 MID2Q9UJV3 735 aa22.82■■□□□ 1.24
RAB40C-212ENST00000569575 MATN2O00339 956 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 TNFSF14O43557 240 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 CBFA2T3O75081 653 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 ACP1P24666 158 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 SLC18A1P54219 525 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 GPLD1P80108 840 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 DAB2P98082 770 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 SQSTM1Q13501 440 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 FRA10AC1Q70Z53 315 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 PIP4P1Q86T03 277 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 GPSM1Q86YR5 675 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 BANPQ8N9N5 519 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 OR5AR1Q8NGP9 310 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 APOPT1Q96IL0 206 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 CNDP2Q96KP4 475 aaKnown RBP22.81■■□□□ 1.24
RAB40C-212ENST00000569575 SLC38A3Q99624 504 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 DPYSL5Q9BPU6 564 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 MRPL46Q9H2W6 279 aaKnown RBP22.81■■□□□ 1.24
RAB40C-212ENST00000569575 CAAP1Q9H8G2 361 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 PDE10AQ9Y233 779 aa22.81■■□□□ 1.24
RAB40C-212ENST00000569575 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.8■■□□□ 1.24
RAB40C-212ENST00000569575 ARHGEF33A8MVX0 844 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 HMGB1P1B2RPK0 211 aaPredicted RBP22.8■■□□□ 1.24
RAB40C-212ENST00000569575 PPM1DO15297 605 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 ANXA5P08758 320 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 CSRP1P21291 193 aaKnown RBP22.8■■□□□ 1.24
RAB40C-212ENST00000569575 RAB28P51157 221 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 PGGT1BP53609 377 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 IRF9Q00978 393 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 DLG1Q12959 904 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 TSNQ15631 228 aaKnown RBP22.8■■□□□ 1.24
RAB40C-212ENST00000569575 PPP1R3AQ16821 1122 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 METTL2BQ6P1Q9 378 aaKnown RBP22.8■■□□□ 1.24
RAB40C-212ENST00000569575 GLRX5Q86SX6 157 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 EXOC3L1Q86VI1 746 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 RDH11Q8TC12 318 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 PATE1Q8WXA2 126 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 ZNF446Q9NWS9 450 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 RNF112Q9ULX5 631 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 ENTPD2Q9Y5L3 495 aa22.8■■□□□ 1.24
RAB40C-212ENST00000569575 CFAP20Q9Y6A4 193 aaKnown RBP22.8■■□□□ 1.24
RAB40C-212ENST00000569575 ZFHX2Q9C0A1 2572 aaPredicted RBP22.79■■□□□ 1.24
RAB40C-212ENST00000569575 TRBV23OR9-2A0A075B6M9 112 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 GOLGA8RI6L899 631 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 CDC7O00311 574 aa22.79■■□□□ 1.24
RAB40C-212ENST00000569575 SH3BP5O60239 455 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms