RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 TEX44Q53QW1 395 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 RHBDF2Q6PJF5 856 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 OR8K3Q8NH51 312 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 SPATA33Q96N06 139 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 OR52B2Q96RD2 323 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 CRAMP1Q96RY5 1269 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 KCNS3Q9BQ31 491 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ZYG11BQ9C0D3 744 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 C12orf10Q9HB07 376 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 FANCFQ9NPI8 374 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 XPNPEP1Q9NQW7 623 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ARL15Q9NXU5 204 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 PCDH10Q9P2E7 1040 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 EFCAB7A8K855 629 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 H7C4K7 107 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 PRODHO43272 600 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 MT-CO1P00395 513 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 MMP12P39900 470 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 GBX2P52951 348 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 TAS2R40P59535 323 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 CDKL1Q00532 357 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ELAVL2Q12926 359 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 MTAPQ13126 283 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 EXOC3L2Q2M3D2 409 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ALG11Q2TAA5 492 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 SPOUT1Q5T280 376 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 MAP1SQ66K74 1059 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ESRP1Q6NXG1 681 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 TAPT1Q6NXT6 567 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ATCAYQ86WG3 371 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 C12orf45Q8N5I9 185 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 PSD4Q8NDX1 1056 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 GANCQ8TET4 914 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 PEX13Q92968 403 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 NECAB3Q96P71 396 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ELOVL4Q9GZR5 314 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 GBA3Q9H227 469 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 TRPV4Q9HBA0 871 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 BTRCQ9Y297 605 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 AGR2O95994 175 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 IFNA10P01566 189 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 PRH1P02810 166 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 UBBP0CG47 229 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 UBCP0CG48 685 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 DARSP14868 501 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 RPL17P18621 184 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 GLUD2P49448 558 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 MLLT6P55198 1093 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 RAP2BP61225 183 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 RPS27AP62979 156 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 UBA52P62987 128 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 HERVK_113P63132 956 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 EN1Q05925 392 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 AIMP2Q13155 320 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ZMYND11Q15326 602 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 GPAT3Q53EU6 434 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 C10orf53Q8N6V4 93 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 NACC2Q96BF6 587 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 NPLQ9BXD5 320 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ERVK-6Q9BXR3 956 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 RGCCQ9H4X1 137 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 C8orf33Q9H7E9 229 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 TCF7L1Q9HCS4 588 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 NT5MQ9NPB1 228 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 BTG4Q9NY30 223 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF219Q9P2Y4 722 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 HSPA12AO43301 675 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 FAM163BP0C2L3 166 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 H2AFB2P0C5Z0 115 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 NR2F1P10589 423 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 YBX3P16989 372 aaKnown RBP eCLIP6.99□□□□□ -1.292e-7■■■□□ 14.8
CNOT1-216ENST00000569240 ATP5C1P36542 298 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 STT3AP46977 705 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 OR3A3P47888 321 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 CDH15P55291 814 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ANKRD54Q6NXT1 300 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 APOBEC3FQ8IUX4 373 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 SLC22A15Q8IZD6 547 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 LRRC52Q8N7C0 313 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 TFAP2CQ92754 450 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 PPCDCQ96CD2 204 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 FAM163AQ96GL9 167 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 PYURFQ96I23 114 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 COQ10AQ96MF6 247 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF578Q96N58 590 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 COMMD3Q9UBI1 195 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ADAMTS6Q9UKP5 1117 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 DPYSL4O14531 572 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ATP6AP2O75787 350 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 SCGNO76038 276 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 NFICP08651 508 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 TPH1P17752 444 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 MAGP20916 626 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 TCEA1P23193 301 aaKnown RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 TLX1P31314 330 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-216ENST00000569240 EIPR1Q53HC9 387 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 ZSWIM9Q86XI8 627 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 TMEM143Q96AN5 459 aa6.99□□□□□ -1.29
CNOT1-216ENST00000569240 LGR4Q9BXB1 951 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms