RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 APOBEC4Q8WW27 367 aaKnown RBP4.64□□□□□ -1.67
CLK3-219ENST00000567805 ASZ1Q8WWH4 475 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 SEC14L1Q92503 715 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 CPT1BQ92523 772 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 ZNF501Q96CX3 271 aaPredicted RBP4.64□□□□□ -1.67
CLK3-219ENST00000567805 LRFN5Q96NI6 719 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 HGH1Q9BTY7 390 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 CARD6Q9BX69 1037 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 GPR87Q9BY21 358 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 PITPNM3Q9BZ71 974 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 CHRNA10Q9GZZ6 450 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 CHRAC1Q9NRG0 131 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 KCND1Q9NSA2 647 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 TREX1Q9NSU2 369 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 CATSPERZQ9NTU4 200 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 SOHLH2Q9NX45 425 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 ACTR10Q9NZ32 417 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 OR6C2Q9NZP2 312 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 BFARQ9NZS9 450 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 ICKQ9UPZ9 632 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 POLHQ9Y253 713 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 ASF1AQ9Y294 204 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 PPP2R2CQ9Y2T4 447 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 JRKLQ9Y4A0 524 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 HEMK1Q9Y5R4 338 aaPredicted RBP4.64□□□□□ -1.67
CLK3-219ENST00000567805 MRPS18BQ9Y676 258 aaKnown RBP4.64□□□□□ -1.67
CLK3-219ENST00000567805 PRSS21Q9Y6M0 314 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 FER1L5A0AVI2 2057 aa4.64□□□□□ -1.67
CLK3-219ENST00000567805 HELZ2Q9BYK8 2649 aaKnown RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 SPTBP11277 2137 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 UBR5O95071 2799 aaPredicted RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 ZNF462Q96JM2 2506 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 A0A0J9YY10 115 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 PIPSLA2A3N6 862 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 TMEM150CB9EJG8 249 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 PRMT5O14744 637 aaPredicted RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 KPNA5O15131 536 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 PFDN6O15212 129 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 SUV39H1O43463 412 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 KATNA1O75449 491 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 GPC4O75487 556 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 CREG1O75629 220 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 SLCO2B1O94956 709 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 APOA4P06727 396 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 KLK3P07288 261 aaPredicted RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 CHRM5P08912 532 aaPredicted RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 FURINP09958 794 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 RAB40ALP0C0E4 278 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 ST6GAL1P15907 406 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 CYP2A7P20853 494 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 MGAT1P26572 445 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 AOAHP28039 575 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 NMBRP28336 390 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 PTPN4P29074 926 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 CCR7P32248 378 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 MAGEA6P43360 314 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 ITGA1P56199 1179 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 SESN2P58004 480 aaPredicted RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 RPS15P62841 145 aaKnown RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 CRADDP78560 199 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 SARNPP82979 210 aaKnown RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 GUCA2AQ02747 115 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 HSPA14Q0VDF9 509 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 ABRQ12979 859 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 GPS2Q13227 327 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 ERV3-1Q14264 604 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 SEMA3AQ14563 771 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 KCNJ11Q14654 390 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 KIR2DS3Q14952 304 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 TMED2Q15363 201 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 DEFB109BQ30KR1 87 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 DNAJC21Q5F1R6 531 aaKnown RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 RNF187Q5TA31 235 aaPredicted RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 ATP1A1-AS1Q5TC04 95 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 IZUMO3Q5VZ72 239 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 PTRHD1Q6GMV3 140 aaKnown RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 MRNIPQ6NTE8 343 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 C16orf46Q6P387 395 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 FBXO38Q6PIJ6 1188 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 UNC5DQ6UXZ4 953 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 NAPRTQ6XQN6 538 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 UNC5AQ6ZN44 842 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 ATG14Q6ZNE5 492 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 SYVN1Q86TM6 617 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 LRRC6Q86X45 466 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 GPR135Q8IZ08 494 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 SLC22A15Q8IZD6 547 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 DSELQ8IZU8 1212 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 MPP5Q8N3R9 675 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 RASGEF1CQ8N431 466 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 PRELID2Q8N945 189 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 SLC38A9Q8NBW4 561 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 C9orf43Q8TAL5 461 aaPredicted RBP4.63□□□□□ -1.67
CLK3-219ENST00000567805 GSDMBQ8TAX9 411 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 CT55Q8WUE5 264 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 THAP4Q8WY91 577 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 MR1Q95460 341 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 CLIP3Q96DZ5 547 aa4.63□□□□□ -1.67
CLK3-219ENST00000567805 RNF31Q96EP0 1072 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms