RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 PSMD13Q9UNM6 376 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 WDR37Q9Y2I8 494 aa13.11□□□□□ -0.31
CLK3-218ENST00000566926 PTPRQQ9UMZ3 2332 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 OR51F1A6NGY5 319 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 LIN7AO14910 233 aaPredicted RBP13.1□□□□□ -0.31
CLK3-218ENST00000566926 TOX3O15405 576 aaPredicted RBP13.1□□□□□ -0.31
CLK3-218ENST00000566926 ERVK-10P10266 1014 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 KRT15P19012 456 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 CD82P27701 267 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 GCAP28676 217 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 SPRP35270 261 aaPredicted RBP13.1□□□□□ -0.31
CLK3-218ENST00000566926 TTPAP49638 278 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 MAPK10P53779 464 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 TMED2Q15363 201 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 TUBB8Q3ZCM7 444 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 HSP90AA5PQ58FG0 334 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 TTMPQ5BVD1 217 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 TEDDM1Q5T9Z0 273 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 NEPROQ6NW34 567 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 RCBTB1Q8NDN9 531 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 GPR150Q8NGU9 434 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 FAM76AQ8TAV0 307 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 ARL8AQ96BM9 186 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 ZDHHC12Q96GR4 267 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 ZNF778Q96MU6 729 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 TAAR9Q96RI9 348 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 RAB33BQ9H082 229 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 CNOT10Q9H9A5 744 aaKnown RBP13.1□□□□□ -0.31
CLK3-218ENST00000566926 SSU72Q9NP77 194 aaKnown RBP13.1□□□□□ -0.31
CLK3-218ENST00000566926 CATSPERZQ9NTU4 200 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 FAM8A1Q9UBU6 413 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 SLC2A6Q9UGQ3 507 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 ACSL6Q9UKU0 697 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 FAM208BQ5VWN6 2430 aa13.1□□□□□ -0.31
CLK3-218ENST00000566926 MN1Q10571 1320 aaPredicted RBP13.1□□□□□ -0.31
CLK3-218ENST00000566926 B4E171 279 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 C9P02748 559 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 PRSS56P0CW18 603 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 HGFP14210 728 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 TYRP1P17643 537 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 ITIH1P19827 911 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 OGNP20774 298 aaKnown RBP13.09□□□□□ -0.31
CLK3-218ENST00000566926 MPSTP25325 297 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 SLC5A2P31639 672 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 TSPAN7P41732 249 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 CD151P48509 253 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 SLC18A1P54219 525 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 UCNP55089 124 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 RAB15P59190 212 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 MAGOHP61326 146 aaKnown RBP13.09□□□□□ -0.31
CLK3-218ENST00000566926 EFTUD2Q15029 972 aaKnown RBP eCLIP13.09□□□□□ -0.315e-12■■■■□ 21.7
CLK3-218ENST00000566926 PLCL1Q15111 1095 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 SNAP47Q5SQN1 464 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 RNF187Q5TA31 235 aaPredicted RBP13.09□□□□□ -0.31
CLK3-218ENST00000566926 CAPRIN2Q6IMN6 1127 aaKnown RBP13.09□□□□□ -0.31
CLK3-218ENST00000566926 CES3Q6UWW8 571 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 ARHGAP22Q7Z5H3 698 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 SDCCAG8Q86SQ7 713 aaPredicted RBP13.09□□□□□ -0.31
CLK3-218ENST00000566926 TRABD2AQ86V40 505 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 CLDN19Q8N6F1 224 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 SMC6Q96SB8 1091 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 INSM2Q96T92 566 aaPredicted RBP13.09□□□□□ -0.31
CLK3-218ENST00000566926 TCF12Q99081 682 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 TRIM56Q9BRZ2 755 aaKnown RBP13.09□□□□□ -0.31
CLK3-218ENST00000566926 ASPSCR1Q9BZE9 553 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 COG4Q9H9E3 785 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 TMEM9Q9P0T7 183 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 EPHA6Q9UF33 1036 aa13.09□□□□□ -0.31
CLK3-218ENST00000566926 CORO1CQ9ULV4 474 aaPredicted RBP13.09□□□□□ -0.31
CLK3-218ENST00000566926 NOVA2Q9UNW9 492 aaKnown RBP13.09□□□□□ -0.31
CLK3-218ENST00000566926 DSPP15924 2871 aaKnown RBP13.09□□□□□ -0.31
CLK3-218ENST00000566926 A8MU76 341 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 CXorf49A8MYA2 514 aaPredicted RBP13.08□□□□□ -0.32
CLK3-218ENST00000566926 CD3EAPO15446 510 aaKnown RBP13.08□□□□□ -0.32
CLK3-218ENST00000566926 CAPN5O15484 640 aaPredicted RBP13.08□□□□□ -0.32
CLK3-218ENST00000566926 MT-ND3P03897 115 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 ANKRD34CP0C6C1 535 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 NR1D1P20393 614 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 ARNTP27540 789 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 CAPZBP47756 277 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 ZNF470Q6ECI4 717 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 CYB5D1Q6P9G0 228 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 TIFABQ6ZNK6 161 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 CCDC91Q7Z6B0 441 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 STRA8Q7Z7C7 330 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 FAM129CQ86XR2 697 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 SPACA3Q8IXA5 215 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 C2CD4AQ8NCU7 369 aaPredicted RBP13.08□□□□□ -0.32
CLK3-218ENST00000566926 ACMSDQ8TDX5 336 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 NAT14Q8WUY8 206 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 ELMO1Q92556 727 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 USP7Q93009 1102 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 NAF1Q96HR8 494 aaKnown RBP13.08□□□□□ -0.32
CLK3-218ENST00000566926 TEFMQ96QE5 360 aaKnown RBP13.08□□□□□ -0.32
CLK3-218ENST00000566926 RBBP8Q99708 897 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 RHOJQ9H4E5 214 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 KIR3DX1Q9H7L2 352 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 SMYD2Q9NRG4 433 aa13.08□□□□□ -0.32
CLK3-218ENST00000566926 IARS2Q9NSE4 1012 aaKnown RBP13.08□□□□□ -0.32
CLK3-218ENST00000566926 INTS10Q9NVR2 710 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms