RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 LRRC8EQ6NSJ5 796 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 ASRGL1Q7L266 308 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 PDZD3Q86UT5 571 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 PIM3Q86V86 326 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 SLC35F3Q8IY50 421 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 SRRM1Q8IYB3 904 aaKnown RBP12.31□□□□□ -0.44
SF3B3-206ENST00000565990 KIAA2013Q8IYS2 634 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 OR6C4Q8NGE1 309 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 EEF1AKMT1Q8WVE0 214 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 TFGQ92734 400 aaPredicted RBP12.31□□□□□ -0.44
SF3B3-206ENST00000565990 FAM136AQ96C01 138 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 MTBPQ96DY7 904 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 MRRFQ96E11 262 aaKnown RBP12.31□□□□□ -0.44
SF3B3-206ENST00000565990 PITPNM3Q9BZ71 974 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 CAB39LQ9H9S4 337 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 UCK1Q9HA47 277 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 SARS2Q9NP81 518 aaKnown RBP12.31□□□□□ -0.44
SF3B3-206ENST00000565990 CPNE7Q9UBL6 633 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 TRMT6Q9UJA5 497 aaKnown RBP12.31□□□□□ -0.44
SF3B3-206ENST00000565990 PSMD13Q9UNM6 376 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 PCM1Q15154 2024 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 GOLGA4Q13439 2230 aaKnown RBP12.31□□□□□ -0.44
SF3B3-206ENST00000565990 GVINP1Q7Z2Y8 2422 aa12.31□□□□□ -0.44
SF3B3-206ENST00000565990 ASXL3Q9C0F0 2248 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 ANKRD12Q6UB98 2062 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 PTPRZ1P23471 2315 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-206ENST00000565990 EME2A4GXA9 379 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-206ENST00000565990 PDZK1P1A8MUH7 402 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 PPM1DO15297 605 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 NUDT21O43809 227 aaKnown RBP12.3□□□□□ -0.44
SF3B3-206ENST00000565990 TYROBPO43914 113 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 RFPL1O75677 317 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 KRT37O76014 449 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 LDOC1O95751 146 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-206ENST00000565990 SLC35G4P0C7Q5 338 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 SLC35E2BP0CK96 405 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 MTHFD1P11586 935 aaKnown RBP12.3□□□□□ -0.44
SF3B3-206ENST00000565990 PNLIPP16233 465 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 CRABP2P29373 138 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 PLA2G5P39877 138 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 HALP42357 657 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 PGGT1BP53609 377 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 NR1D2Q14995 579 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 SPRED3Q2MJR0 410 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 C14orf28Q4W4Y0 310 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 UNC5DQ6UXZ4 953 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 SH2D5Q6ZV89 423 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 ZNF438Q7Z4V0 828 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 GLRX5Q86SX6 157 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 SLC9B2Q86UD5 537 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 SPNS2Q8IVW8 549 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 NAXDQ8IW45 347 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 CPNE9Q8IYJ1 553 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 CYP4X1Q8N118 509 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 NKAPQ8N5F7 415 aaKnown RBP12.3□□□□□ -0.44
SF3B3-206ENST00000565990 ANKRD42Q8N9B4 389 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 AVL9Q8NBF6 648 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 NETO1Q8TDF5 533 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 LRRC8CQ8TDW0 803 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 SETD7Q8WTS6 366 aaKnown RBP12.3□□□□□ -0.44
SF3B3-206ENST00000565990 ANKRD49Q8WVL7 239 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 PATE1Q8WXA2 126 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 ASB11Q8WXH4 323 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 KLHL29Q96CT2 875 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 RMDN2Q96LZ7 410 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 VPS11Q9H270 941 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 GPAMQ9HCL2 828 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 SAR1AQ9NR31 198 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 ABCF3Q9NUQ8 709 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 GEMIN8Q9NWZ8 242 aaKnown RBP12.3□□□□□ -0.44
SF3B3-206ENST00000565990 PADI4Q9UM07 663 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 HEBP2Q9Y5Z4 205 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 COLEC10Q9Y6Z7 277 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 DMXL1Q9Y485 3027 aa12.3□□□□□ -0.44
SF3B3-206ENST00000565990 RP1P56715 2156 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 TRBV23OR9-2A0A075B6M9 112 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 IQANK1A0A1B0GTG1 560 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 OR52A4PA6NMU1 304 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 B4DGG1 531 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 IFRD1O00458 451 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-206ENST00000565990 SLC30A4O14863 429 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 EDF1O60869 148 aaKnown RBP12.29□□□□□ -0.44
SF3B3-206ENST00000565990 PSIP1O75475 530 aaKnown RBP12.29□□□□□ -0.44
SF3B3-206ENST00000565990 UNC5CO95185 931 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 TGDSO95455 350 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 C2P06681 752 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 TPBGLP0DKB5 382 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 GLB1P16278 677 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 ZNF37AP17032 561 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-206ENST00000565990 CKMT2P17540 419 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 CSRP1P21291 193 aaKnown RBP12.29□□□□□ -0.44
SF3B3-206ENST00000565990 SAT1P21673 171 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 ACP1P24666 158 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 MAPK9P45984 424 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 RPIAP49247 311 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 SLC12A2P55011 1212 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 WDR4P57081 412 aaKnown RBP12.29□□□□□ -0.44
SF3B3-206ENST00000565990 ABRQ12979 859 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 PDAP1Q13442 181 aaKnown RBP12.29□□□□□ -0.44
SF3B3-206ENST00000565990 BMPR2Q13873 1038 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms