RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 KRT87PA6NCN2 255 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 TLR4O00206 839 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 TGDSO95455 350 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 AK4P27144 223 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-213ENST00000565834 BLKP51451 505 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 CDH13P55290 713 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 CLCQ05315 142 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 GALNT1Q10472 559 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-213ENST00000565834 SF3A3Q12874 501 aaKnown RBP eCLIP18.26■□□□□ 0.51
COMMD4-213ENST00000565834 ILF3Q12906 894 aaKnown RBP eCLIP18.26■□□□□ 0.51
COMMD4-213ENST00000565834 TCEA2Q15560 299 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 CCSMST1Q4G0I0 132 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 GKAP1Q5VSY0 366 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-213ENST00000565834 SPATA21Q7Z572 469 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 BMP8AQ7Z5Y6 402 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 DCUN1D3Q8IWE4 304 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 PIWIL2Q8TC59 973 aaKnown RBP18.26■□□□□ 0.51
COMMD4-213ENST00000565834 ATL1Q8WXF7 558 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 THOC1Q96FV9 657 aaKnown RBP18.26■□□□□ 0.51
COMMD4-213ENST00000565834 C12orf66Q96MD2 445 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 SHCBP1LQ9BZQ2 653 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 CD244Q9BZW8 370 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 NPHS2Q9NP85 383 aa18.26■□□□□ 0.51
COMMD4-213ENST00000565834 MARCOQ9UEW3 520 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-213ENST00000565834 CFAP20Q9Y6A4 193 aaKnown RBP18.26■□□□□ 0.51
COMMD4-213ENST00000565834 E2F3O00716 465 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 SNX3O60493 162 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 CCNT2O60583 730 aaKnown RBP18.25■□□□□ 0.51
COMMD4-213ENST00000565834 KITP10721 976 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 TSPAN8P19075 237 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 MPSTP25325 297 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 GGT5P36269 586 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 ACTR1BP42025 376 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 ACTR1AP61163 376 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 SRSF5Q13243 272 aaKnown RBP18.25■□□□□ 0.51
COMMD4-213ENST00000565834 UAP1L1Q3KQV9 507 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 ZNF542PQ5EBM4 170 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 LYSMD4Q5XG99 296 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 METTL2BQ6P1Q9 378 aaKnown RBP18.25■□□□□ 0.51
COMMD4-213ENST00000565834 SLC30A9Q6PML9 568 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 PIGWQ7Z7B1 504 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 PHACTR4Q8IZ21 702 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 ZNF781Q8N8C0 355 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 PHC3Q8NDX5 983 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 OR5AR1Q8NGP9 310 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 CCL4L1Q8NHW4 92 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 INSM2Q96T92 566 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-213ENST00000565834 PKP4Q99569 1192 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 TRIT1Q9H3H1 467 aaKnown RBP18.25■□□□□ 0.51
COMMD4-213ENST00000565834 SEMA4BQ9NPR2 832 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-213ENST00000565834 PRDM8Q9NQV8 689 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 PNPOQ9NVS9 261 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 OPTCQ9UBM4 332 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-213ENST00000565834 TNRC6BQ9UPQ9 1833 aaKnown RBP18.25■□□□□ 0.51
COMMD4-213ENST00000565834 MYO1CO00159 1063 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 BCAT2O15382 392 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-213ENST00000565834 STK16O75716 305 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 HALP42357 657 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 DHPSP49366 369 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-213ENST00000565834 LCP2Q13094 533 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 PMS2CLQ68D20 193 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 CUZD1Q86UP6 607 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 OR9A1PQ8NGU1 263 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 OR5K2Q8NHB8 316 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 AGR3Q8TD06 166 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 TRPC4APQ8TEL6 797 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 RAD51AP1Q96B01 352 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 ARHGEF17Q96PE2 2063 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-213ENST00000565834 HGH1Q9BTY7 390 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 GSDMCQ9BYG8 508 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 TCEAL2Q9H3H9 227 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-213ENST00000565834 DNAJC28Q9NX36 388 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 STOX2Q9P2F5 926 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-213ENST00000565834 KLHL14Q9P2G3 628 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 TBC1D29Q9UFV1 150 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 CIDEBQ9UHD4 219 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 KLF15Q9UIH9 416 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 HAO1Q9UJM8 370 aa18.25■□□□□ 0.51
COMMD4-213ENST00000565834 K7EPI3 171 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 MLYCDO95822 493 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 SLC16A8O95907 504 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 CTSEP14091 401 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 ITPKAP23677 461 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 GDF5P43026 501 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 RPL14P50914 215 aaKnown RBP18.24■□□□□ 0.51
COMMD4-213ENST00000565834 AFF3P51826 1226 aaKnown RBP18.24■□□□□ 0.51
COMMD4-213ENST00000565834 GTF2H2Q13888 395 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 CLCA4Q14CN2 919 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 RBBP7Q16576 425 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 GTF2H2CQ6P1K8 395 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 WASH2PQ6VEQ5 465 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 GOLGA7Q7Z5G4 137 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 SPATS2Q86XZ4 545 aaKnown RBP18.24■□□□□ 0.51
COMMD4-213ENST00000565834 WDR75Q8IWA0 830 aaKnown RBP18.24■□□□□ 0.51
COMMD4-213ENST00000565834 TBC1D21Q8IYX1 336 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 GPBAR1Q8TDU6 330 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 SKA1Q96BD8 255 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 WASH6PQ9NQA3 447 aa18.24■□□□□ 0.51
COMMD4-213ENST00000565834 IMP3Q9NV31 184 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms